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Protein Science
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Protein Science
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Applications of cell free protein synthesis in protein design

Authors: Ella Lucille Thornton; Sarah Maria Paterson; Michael J. Stam; Christopher W. Wood; Nadanai Laohakunakorn; Lynne Regan;

Applications of cell free protein synthesis in protein design

Abstract

AbstractIn protein design, the ultimate test of success is that the designs function as desired. Here, we discuss the utility of cell free protein synthesis (CFPS) as a rapid, convenient and versatile method to screen for activity. We champion the use of CFPS in screening potential designs. Compared to in vivo protein screening, a wider range of different activities can be evaluated using CFPS, and the scale on which it can easily be used—screening tens to hundreds of designed proteins—is ideally suited to current needs. Protein design using physics‐based strategies tended to have a relatively low success rate, compared with current machine‐learning based methods. Screening steps (such as yeast display) were often used to identify proteins that displayed the desired activity from many designs that were highly ranked computationally. We also describe how CFPS is well‐suited to identify the reasons designs fail, which may include problems with transcription, translation, and solubility, in addition to not achieving the desired structure and function.

Country
United Kingdom
Related Organizations
Keywords

Cell-Free System, medium throughput, screening, Protein Biosynthesis, Proteins, Review Article, protein design, surface immobilization, Protein Engineering, cell-free protein synthesis

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    popularity
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    influence
    This indicator reflects the overall/total impact of an article in the research community at large, based on the underlying citation network (diachronically).
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    impulse
    This indicator reflects the initial momentum of an article directly after its publication, based on the underlying citation network.
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selected citations
These citations are derived from selected sources.
This is an alternative to the "Influence" indicator, which also reflects the overall/total impact of an article in the research community at large, based on the underlying citation network (diachronically).
BIP!Citations provided by BIP!
popularity
This indicator reflects the "current" impact/attention (the "hype") of an article in the research community at large, based on the underlying citation network.
BIP!Popularity provided by BIP!
influence
This indicator reflects the overall/total impact of an article in the research community at large, based on the underlying citation network (diachronically).
BIP!Influence provided by BIP!
impulse
This indicator reflects the initial momentum of an article directly after its publication, based on the underlying citation network.
BIP!Impulse provided by BIP!
12
Top 10%
Average
Top 10%
Green
hybrid