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Protein Science
Article . 2024 . Peer-reviewed
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PubMed Central
Article . 2024
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Protein Science
Article . 2024
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Transient interdomain interactions in free USP14 shape its conformational ensemble

Authors: Johannes Salomonsson; Björn Wallner; Linda Sjöstrand; Pádraig D'Arcy; Maria Sunnerhagen; Alexandra Ahlner;

Transient interdomain interactions in free USP14 shape its conformational ensemble

Abstract

AbstractThe deubiquitinase (DUB) ubiquitin‐specific protease 14 (USP14) is a dual domain protein that plays a regulatory role in proteasomal degradation and has been identified as a promising therapeutic target. USP14 comprises a conserved USP domain and a ubiquitin‐like (Ubl) domain separated by a 25‐residue linker. The enzyme activity of USP14 is autoinhibited in solution, but is enhanced when bound to the proteasome, where the Ubl and USP domains of USP14 bind to the Rpn1 and Rpt1/Rpt2 units, respectively. No structure of full‐length USP14 in the absence of proteasome has yet been presented, however, earlier work has described how transient interactions between Ubl and USP domains in USP4 and USP7 regulate DUB activity. To better understand the roles of the Ubl and USP domains in USP14, we studied the Ubl domain alone and in full‐length USP14 by nuclear magnetic resonance spectroscopy and used small angle x‐ray scattering and molecular modeling to visualize the entire USP14 protein ensemble. Jointly, our results show how transient interdomain interactions between the Ubl and USP domains of USP14 predispose its conformational ensemble for proteasome binding, which may have functional implications for proteasome regulation and may be exploited in the design of future USP14 inhibitors.

Countries
Sweden, Germany
Keywords

Models, Molecular, Proteasome Endopeptidase Complex, Structural Biology, Ubiquitin, Proteolysis, DUB; molecular modeling; NMR; protein dynamics; SAXS, Molecular Conformation, 610, Research Articles, Strukturbiologi, info:eu-repo/classification/ddc/610

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selected citations
These citations are derived from selected sources.
This is an alternative to the "Influence" indicator, which also reflects the overall/total impact of an article in the research community at large, based on the underlying citation network (diachronically).
BIP!Citations provided by BIP!
popularity
This indicator reflects the "current" impact/attention (the "hype") of an article in the research community at large, based on the underlying citation network.
BIP!Popularity provided by BIP!
influence
This indicator reflects the overall/total impact of an article in the research community at large, based on the underlying citation network (diachronically).
BIP!Influence provided by BIP!
impulse
This indicator reflects the initial momentum of an article directly after its publication, based on the underlying citation network.
BIP!Impulse provided by BIP!
9
Top 10%
Average
Top 10%
Green
hybrid