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Protein Science
Article . 2023 . Peer-reviewed
License: CC BY
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Article . 2023
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Protein Science
Article . 2023
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L‐serine biosynthesis in the human central nervous system: Structure and function of phosphoserine aminotransferase

Authors: Francesco Marchesani; Erika Zangelmi; Giulia Murtas; Elisa Costanzi; Raheem Ullah; Alessio Peracchi; Stefano Bruno; +4 Authors

L‐serine biosynthesis in the human central nervous system: Structure and function of phosphoserine aminotransferase

Abstract

AbstractOrganisms from all kingdoms of life synthesize L‐serine (L‐Ser) from 3‐phosphoglycerate through the phosphorylated pathway, a three‐step diversion of glycolysis. Phosphoserine aminotransferase (PSAT) catalyzes the intermediate step, the pyridoxal 5′‐phosphate‐dependent transamination of 3‐phosphohydroxypyruvate and L‐glutamate to O‐phosphoserine (OPS) and α‐ketoglutarate. PSAT is particularly relevant in the central nervous system of mammals because L‐Ser is the metabolic precursor of D‐serine, cysteine, phospholipids, and nucleotides. Several mutations in the human psat gene have been linked to serine deficiency disorders, characterized by severe neurological symptoms. Furthermore, PSAT is overexpressed in many tumors and this overexpression has been associated with poor clinical outcomes. Here, we report the detailed functional and structural characterization of the recombinant human PSAT. The reaction catalyzed by PSAT is reversible, with an equilibrium constant of about 10, and the enzyme is very efficient, with a kcat/Km of 5.9 × 106 M−1 s−1, thus contributing in driving the pathway towards the products despite the extremely unfavorable first step catalyzed by 3‐phosphoglycerate dehydrogenase. The 3D X‐ray crystal structure of PSAT was solved in the substrate‐free as well as in the OPS‐bound forms. Both structures contain eight protein molecules in the asymmetric unit, arranged in four dimers, with a bound cofactor in each subunit. In the substrate‐free form, the active site of PSAT contains a sulfate ion that, in the substrate‐bound form, is replaced by the phosphate group of OPS. Interestingly, fast crystal soaking used to produce the substrate‐bound form allowed the trapping of different intermediates along the catalytic cycle.

Country
Italy
Keywords

Central Nervous System, Mammals, phosphoserine aminotransferase, 570, tumor progression factor, Full‐length Papers, NMDA receptor, Settore BIOS-07/A - Biochimica, neurological disorders; NMDA receptor; phosphorylated pathway; phosphoserine aminotransferase; tumor progression factor, Serine, Animals, Humans, neurological disorder, phosphorylated pathway, Phosphoglycerate Dehydrogenase, Transaminases

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selected citations
These citations are derived from selected sources.
This is an alternative to the "Influence" indicator, which also reflects the overall/total impact of an article in the research community at large, based on the underlying citation network (diachronically).
BIP!Citations provided by BIP!
popularity
This indicator reflects the "current" impact/attention (the "hype") of an article in the research community at large, based on the underlying citation network.
BIP!Popularity provided by BIP!
influence
This indicator reflects the overall/total impact of an article in the research community at large, based on the underlying citation network (diachronically).
BIP!Influence provided by BIP!
impulse
This indicator reflects the initial momentum of an article directly after its publication, based on the underlying citation network.
BIP!Impulse provided by BIP!
14
Top 10%
Average
Top 10%
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hybrid
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