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Protein Science
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Protein Science
Article . 2010 . Peer-reviewed
License: Wiley Online Library User Agreement
Data sources: Crossref
Protein Science
Article . 2010
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Characterization of site‐directed mutants of residues R58, R59, D116, W340 and R372 in the active site of E. coli cystathionine β‐lyase

Authors: Pratik H, Lodha; Allison F, Jaworski; Susan M, Aitken;

Characterization of site‐directed mutants of residues R58, R59, D116, W340 and R372 in the active site of E. coli cystathionine β‐lyase

Abstract

AbstractCystathionine β‐lyase (CBL) catalyzes the hydrolysis of L‐cystathionine (L‐Cth) to produce L‐homocysteine, pyruvate, and ammonia. A series of active‐site mutants of Escherichia coli CBL (eCBL) was constructed to investigate the roles of residues R58, R59, D116, W340, and R372 in catalysis and inhibition by aminoethoxyvinylglycine (AVG). The effects of these mutations on the kcat/K for the β‐elimination reaction range from a reduction of only 3‐fold for D116A and D116N to 6 orders of magnitude for the R372L and R372A mutants. The order of importance of these residues for the hydrolysis of L‐Cth is: R372 >> R58 > W340 ≈ R59 > D116. Comparison of the kinetic parameters for L‐Cth hydrolysis with those for inhibition of eCBL by AVG demonstrates that residue R58 tethers the distal carboxylate group of the substrate and confirms that residues W340 and R372 interact with the α‐carboxylate moiety. The increase in the pKa of the acidic limb and decrease in the pKa of the basic limb of the kcat/K versus pH profiles of the R58K and R58A mutants, respectively, support a role for this residue in modulating the pKa of an active‐site residue.

Related Organizations
Keywords

Aspartic Acid, Hydrolysis, Glycine, Tryptophan, Lyases, Arginine, Catalysis, Cystathionine, Catalytic Domain, Escherichia coli, Mutagenesis, Site-Directed, Enzyme Inhibitors

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selected citations
These citations are derived from selected sources.
This is an alternative to the "Influence" indicator, which also reflects the overall/total impact of an article in the research community at large, based on the underlying citation network (diachronically).
BIP!Citations provided by BIP!
popularity
This indicator reflects the "current" impact/attention (the "hype") of an article in the research community at large, based on the underlying citation network.
BIP!Popularity provided by BIP!
influence
This indicator reflects the overall/total impact of an article in the research community at large, based on the underlying citation network (diachronically).
BIP!Influence provided by BIP!
impulse
This indicator reflects the initial momentum of an article directly after its publication, based on the underlying citation network.
BIP!Impulse provided by BIP!
14
Average
Average
Top 10%
bronze