
doi: 10.1002/jcc.20571
pmid: 17186478
AbstractIn this article, we propose a relatively similar measure to compare RNA secondary structures. We first transform an RNA secondary structure into a special sequence representation. Then, on the basis of symbolic sequence complexity, we obtain the relative distance of RNA secondary structures. The examination of similarities/dissimilarities of a set of RNA secondary structures at the 3′‐terminus of different viruses illustrates the utility of the approach. © 2006 Wiley Periodicals, Inc. J Comput Chem 28: 508–512, 2007
Base Sequence, Molecular Sequence Data, Viruses, Nucleic Acid Conformation, RNA, Computer Simulation, Sequence Alignment, Phylogeny
Base Sequence, Molecular Sequence Data, Viruses, Nucleic Acid Conformation, RNA, Computer Simulation, Sequence Alignment, Phylogeny
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