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image/svg+xml Jakob Voss, based on art designer at PLoS, modified by Wikipedia users Nina and Beao Closed Access logo, derived from PLoS Open Access logo. This version with transparent background. http://commons.wikimedia.org/wiki/File:Closed_Access_logo_transparent.svg Jakob Voss, based on art designer at PLoS, modified by Wikipedia users Nina and Beao Journal of Cellular ...arrow_drop_down
image/svg+xml Jakob Voss, based on art designer at PLoS, modified by Wikipedia users Nina and Beao Closed Access logo, derived from PLoS Open Access logo. This version with transparent background. http://commons.wikimedia.org/wiki/File:Closed_Access_logo_transparent.svg Jakob Voss, based on art designer at PLoS, modified by Wikipedia users Nina and Beao
Journal of Cellular Biochemistry
Article . 2006 . Peer-reviewed
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Tristetraprolin recruits functional mRNA decay complexes to ARE sequences

Authors: Heidi H, Hau; Richard J, Walsh; Rachel L, Ogilvie; Darlisha A, Williams; Cavan S, Reilly; Paul R, Bohjanen;

Tristetraprolin recruits functional mRNA decay complexes to ARE sequences

Abstract

AbstractAU‐rich elements (AREs) in the 3′ untranslated region (UTR) of numerous mammalian transcripts function as instability elements that promote rapid mRNA degradation. Tristetraprolin (TTP) is an ARE‐binding protein that promotes rapid mRNA decay through mechanisms that are poorly understood. A 31 nucleotide ARE sequences from the TNF‐alpha 3′ UTR promoted TTP‐dependent mRNA decay when it was inserted into the 3′ UTR of a beta‐globin reporter transcript, indicating that this short sequence was sufficient for TTP function. We used a gel shift assay to identify a TTP‐containing complex in cytoplasmic extracts from TTP‐transfected HeLa cells that bound specifically to short ARE sequences. This TTP‐containing complex also contained the 5′–3′ exonuclease Xrn1 and the exosome component PM‐scl75 because it was super‐shifted with anti‐Xrn1 or anti‐PMscl75 antibodies. RNA affinity purification verified that these proteins associated specifically with ARE sequences in a TTP‐dependent manner. Using a competition binding assay, we found that the TTP‐containing complex bound with high affinity to short ARE sequences from GM‐CSF, IL‐3, TNF‐alpha, IL‐2, and c‐fos, but did not bind to a U‐rich sequence from c‐myc, a 22 nucleotide poly U sequence or a mutated GM‐CSF control sequence. High affinity binding by the TTP‐containing complex correlated with TTP‐dependent deadenylation and decay of capped, polyadenylated transcripts in a cell‐free mRNA decay assay, suggesting that the TTP‐containing complex was functional. These data support a model whereby TTP functions to enhance mRNA decay by recruiting components of the cellular mRNA decay machinery to the transcript. J. Cell. Biochem. 100: 1477–1492, 2007. © 2006 Wiley‐Liss, Inc.

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Keywords

Cell-Free System, Tumor Necrosis Factor-alpha, RNA Stability, Blotting, Western, Granulocyte-Macrophage Colony-Stimulating Factor, Electrophoretic Mobility Shift Assay, Transfection, Chromatography, Affinity, Tristetraprolin, Humans, Interleukin-2, Electrophoresis, Polyacrylamide Gel, 3' Untranslated Regions, HeLa Cells, Protein Binding

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selected citations
These citations are derived from selected sources.
This is an alternative to the "Influence" indicator, which also reflects the overall/total impact of an article in the research community at large, based on the underlying citation network (diachronically).
BIP!Citations provided by BIP!
popularity
This indicator reflects the "current" impact/attention (the "hype") of an article in the research community at large, based on the underlying citation network.
BIP!Popularity provided by BIP!
influence
This indicator reflects the overall/total impact of an article in the research community at large, based on the underlying citation network (diachronically).
BIP!Influence provided by BIP!
impulse
This indicator reflects the initial momentum of an article directly after its publication, based on the underlying citation network.
BIP!Impulse provided by BIP!
90
Top 10%
Top 10%
Top 10%
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