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Biotechnology and Applied Biochemistry
Article . 2020 . Peer-reviewed
License: Wiley Online Library User Agreement
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Biochemical features of dye‐decolorizing peroxidases: Current impact on lignin degradation

Authors: Catucci G.; Valetti F.; Sadeghi S. J.; Gilardi G.;

Biochemical features of dye‐decolorizing peroxidases: Current impact on lignin degradation

Abstract

AbstractDye‐decolorizing peroxidases (DyP) were originally discovered in fungi for their ability to decolorize several different industrial dyes. DyPs catalyze the oxidation of a variety of substrates such as phenolic and nonphenolic aromatic compounds. Catalysis occurs in the active site or on the surface of the enzyme depending on the size of the substrate and on the existence of radical transfer pathways available in the enzyme. DyPs show the typical features of heme‐containing enzymes with a Soret peak at 404–408 nm. They bind hydrogen peroxide that leads to the formation of the so‐called Compound I, the key intermediate for catalysis. This then decays into Compound II yielding back Fe(III) at its resting state. Each catalytic cycle uses two electrons from suitable electron donors and generates two product molecules.DyPs are classified as a separate class of peroxidases. As all peroxidases they encompass a conserved histidine that acts as the fifth heme ligand, however all primary DyP sequences contain a conserved GxxDG motif and a distal arginine that is their characteristic. Given their ability to attack monomeric and dimeric lignin model compounds as well as polymeric lignocellulose, DyPs are a promising class of biocatalysts for lignin degradation that not only represents a source of valuable fine chemicals, but it also constitutes a fundamental step in biofuels production. Research efforts are envisioned for the improvement of the activity of DyPs against lignin, through directed evolution, ration protein design, or one‐pot combination with other enzymes to reach satisfactory conversion levels for industrial applications.

Country
Italy
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Keywords

Models, Molecular, Bacteria, Fungi, Lignin, Peroxidases, biofuel; biotechnology; catalysis; decolorizing; dye; DyP; energy; lignin; peroxidase; Bacteria; Biocatalysis; Biofuels; Biotechnology; Catalytic Domain; Coloring Agents; Fungi; Lignin; Models, Molecular; Peroxidases, Biofuels, Catalytic Domain, Biocatalysis, Coloring Agents, Biotechnology

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    popularity
    This indicator reflects the "current" impact/attention (the "hype") of an article in the research community at large, based on the underlying citation network.
    Top 1%
    influence
    This indicator reflects the overall/total impact of an article in the research community at large, based on the underlying citation network (diachronically).
    Top 10%
    impulse
    This indicator reflects the initial momentum of an article directly after its publication, based on the underlying citation network.
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selected citations
These citations are derived from selected sources.
This is an alternative to the "Influence" indicator, which also reflects the overall/total impact of an article in the research community at large, based on the underlying citation network (diachronically).
BIP!Citations provided by BIP!
popularity
This indicator reflects the "current" impact/attention (the "hype") of an article in the research community at large, based on the underlying citation network.
BIP!Popularity provided by BIP!
influence
This indicator reflects the overall/total impact of an article in the research community at large, based on the underlying citation network (diachronically).
BIP!Influence provided by BIP!
impulse
This indicator reflects the initial momentum of an article directly after its publication, based on the underlying citation network.
BIP!Impulse provided by BIP!
52
Top 1%
Top 10%
Top 1%
Green
bronze