AbstractRecent developments show encouraging results for the use of DNA as a construction material for nanometer‐sized objects. Today, however, DNA‐based molecular nanoarchitectures are constructed with mainly unmodified or at best end‐modified oligonucleotides, thus shifting the development of functionalized DNA structures into the limelight. One of most recent developments in this direction is the substitution of the canonical Watson–Crick base pairs by metal complexes. In this way “metal–base pairs” are created, which could potentially impart magnetic or conductive properties to DNA‐based nanostructures. This review summarizes research which started almost 45 years ago with the investigation of how metal ions interact with unmodified DNA and which recently culminated in the development of artificial ligand‐like nucleobases so far able to coordinate up to ten metal ions inside a single DNA duplex in a programmable fashion.