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MEG and EEG data analysis with MNE-Python

Authors: Alexandre eGramfort; Alexandre eGramfort; Alexandre eGramfort; Martin eLuessi; Eric eLarson; Denis A Engemann; Denis A Engemann; +10 Authors

MEG and EEG data analysis with MNE-Python

Abstract

Magnetoencephalography and electroencephalography (M/EEG) measure the weak electromagnetic signals generated by neuronal activity in the brain. Using these signals to characterize and locate neural activation in the brain is a challenge that requires expertise in physics, signal processing, statistics, and numerical methods. As part of the MNE software suite, MNE-Python is an open-source software package that addresses this challenge by providing state-of-the-art algorithms implemented in Python that cover multiple methods of data preprocessing, source localization, statistical analysis, and estimation of functional connectivity between distributed brain regions. All algorithms and utility functions are implemented in a consistent manner with well-documented interfaces, enabling users to create M/EEG data analysis pipelines by writing Python scripts. Moreover, MNE-Python is tightly integrated with the core Python libraries for scientific comptutation (NumPy, SciPy) and visualization (matplotlib and Mayavi), as well as the greater neuroimaging ecosystem in Python via the Nibabel package. The code is provided under the new BSD license allowing code reuse, even in commercial products. Although MNE-Python has only been under heavy development for a couple of years, it has rapidly evolved with expanded analysis capabilities and pedagogical tutorials because multiple labs have collaborated during code development to help share best practices. MNE-Python also gives easy access to preprocessed datasets, helping users to get started quickly and facilitating reproducibility of methods by other researchers. Full documentation, including dozens of examples, is available at http://martinos.org/mne.

Countries
France, United States, France, Germany, Finland
Keywords

ta221, [INFO.INFO-IM] Computer Science [cs]/Medical Imaging, 610, Neuroimaging, Neurosciences. Biological psychiatry. Neuropsychiatry, ta3112, [STAT.AP] Statistics [stat]/Applications [stat.AP], Methods Article, Magnetoencephalography (MEG), ta318, magnetoencephalography (MEG), electroencephalography (EEG), Electroencephalography (EEG), ta515, ta218, open-source, info:eu-repo/classification/ddc/610, ta217, ta113, ta214, neuroimaging, ta114, software, [STAT.OT] Statistics [stat]/Other Statistics [stat.ML], python, Software, RC321-571, Neuroscience

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selected citations
These citations are derived from selected sources.
This is an alternative to the "Influence" indicator, which also reflects the overall/total impact of an article in the research community at large, based on the underlying citation network (diachronically).
BIP!Citations provided by BIP!
popularity
This indicator reflects the "current" impact/attention (the "hype") of an article in the research community at large, based on the underlying citation network.
BIP!Popularity provided by BIP!
influence
This indicator reflects the overall/total impact of an article in the research community at large, based on the underlying citation network (diachronically).
BIP!Influence provided by BIP!
impulse
This indicator reflects the initial momentum of an article directly after its publication, based on the underlying citation network.
BIP!Impulse provided by BIP!
3K
Top 0.01%
Top 0.1%
Top 1%
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gold