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Immune status assessment based on plasma proteomics with meta graph convolutional networks

Authors: Min Zhang; Nan Xu; Qi Cheng; Jing Ye; Shiwei Wu; Haoliang Liu; Chengkui Zhao; +2 Authors

Immune status assessment based on plasma proteomics with meta graph convolutional networks

Abstract

Plasma proteins, especially immune-related proteins, are vital for assessing immune health and predicting disease risks. Despite their significance, the link between these proteins and systemic immune function remains unclear. To bridge this gap, researchers developed ProMetaGCN, a model integrating meta-learning, graph convolutional networks, and protein-protein interaction (PPI) data to evaluate immune status via plasma proteomics. This framework identified 309 immune-related factors with associated biological functions and pathways. Using six machine learning methods, four algorithms (Random Forest, LightGBM, XGBoost, Lasso) were selected for immune profiling and aging analysis, revealing ADAMTS13, GDF15, and SERPINF2 as key biomarkers. Validation across two COVID-19 cohorts confirmed the model's robustness, showing immune status correlates with infection progression and recovery. Furthermore, the study proposed ImmuneAgeGap, a novel metric linking immune profiles to survival rates in non-small-cell lung cancer (NSCLC) patients. These insights advance personalized immune health strategies and disease prevention.

Related Organizations
Keywords

Proteomics, Meta-learning graph convolutional network, Lung Neoplasms, SARS-CoV-2, COVID-19, Plasma proteomics, Immune-related proteins, Immune status score, Blood Proteins, QH426-470, Machine Learning, Carcinoma, Non-Small-Cell Lung, Machine learning, Genetics, Humans, Protein Interaction Maps, TP248.13-248.65, Software, Biomarkers, Algorithms, Biotechnology

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selected citations
These citations are derived from selected sources.
This is an alternative to the "Influence" indicator, which also reflects the overall/total impact of an article in the research community at large, based on the underlying citation network (diachronically).
BIP!Citations provided by BIP!
popularity
This indicator reflects the "current" impact/attention (the "hype") of an article in the research community at large, based on the underlying citation network.
BIP!Popularity provided by BIP!
influence
This indicator reflects the overall/total impact of an article in the research community at large, based on the underlying citation network (diachronically).
BIP!Influence provided by BIP!
impulse
This indicator reflects the initial momentum of an article directly after its publication, based on the underlying citation network.
BIP!Impulse provided by BIP!
0
Average
Average
Average
Green
gold
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Cancer Research