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Shuffling biological sequences with motif constraints

descriptionPublicationkeyboard_double_arrow_right Article 01 Jun 2008 France English Publisher:Elsevier BVJournal:Journal of Discrete Algorithms, volume 6, pages 192-204 (issn: 1570-8667, Copyright policy )
Authors: Rivière, R.; Barth, D.; Cohen, J.; Denise, Alain;

doi: 10.1016/j.jda.2007.06.001

Shuffling biological sequences with motif constraints

Keywords

[INFO.INFO-CC]Computer Science [cs]/Computational Complexity [cs.CC], Biochemistry, molecular biology, Analysis of algorithms and problem complexity, [INFO.INFO-DS]Computer Science [cs]/Data Structures and Algorithms [cs.DS], [INFO.INFO-DS] Computer Science [cs]/Data Structures and Algorithms [cs.DS], 510, Theoretical Computer Science, [SDV.BBM] Life Sciences [q-bio]/Biochemistry, Molecular Biology, Random sequence generation, Discrete Mathematics and Combinatorics, Computational methods for problems pertaining to biology, [INFO.INFO-BI] Computer Science [cs]/Bioinformatics [q-bio.QM], [SDV.BIBS] Life Sciences [q-bio]/Quantitative Methods [q-bio.QM], random sequence generation, Motifs constraints, ACM: J.: Computer Applications/J.7: COMPUTERS IN OTHER SYSTEMS, [SDV.BIBS]Life Sciences [q-bio]/Quantitative Methods [q-bio.QM], [INFO.INFO-MO]Computer Science [cs]/Modeling and Simulation, 004, NP-completeness, Computational Theory and Mathematics, [INFO.INFO-CC] Computer Science [cs]/Computational Complexity [cs.CC], [INFO.INFO-MO] Computer Science [cs]/Modeling and Simulation, [INFO.INFO-BI]Computer Science [cs]/Bioinformatics [q-bio.QM]

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selected citations
These citations are derived from selected sources.
This is an alternative to the "Influence" indicator, which also reflects the overall/total impact of an article in the research community at large, based on the underlying citation network (diachronically).
BIP!Citations provided by BIP!
popularity
This indicator reflects the "current" impact/attention (the "hype") of an article in the research community at large, based on the underlying citation network.
BIP!Popularity provided by BIP!
influence
This indicator reflects the overall/total impact of an article in the research community at large, based on the underlying citation network (diachronically).
BIP!Influence provided by BIP!
impulse
This indicator reflects the initial momentum of an article directly after its publication, based on the underlying citation network.
BIP!Impulse provided by BIP!
13
Average
Top 10%
Average
hybrid
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