
Abstract Autoimmune encephalitis (AE) is an inflammatory syndrome of the central nervous system (CNS) triggered by aberrant immune responses against neuronal intracellular (IC-AE) or surface (NS-AE) autoantigens. The resulting neuronal alterations and clinical trajectories differ, with IC-AE often leading to fatal outcomes. Unfortunately, the scarce availability of tissue from AE cases has hampered systematic analyses that would allow an understanding of the pathogenesis underlying neuronal alterations in T cell-mediated AE syndromes. Here, we assembled a cohort comprising both NS-AE (n = 8) and IC-AE (n = 12) from multiple institutions to delineate key histopathological features that distinguish neuronal pathology between IC-AE and NS-AE. In contrast to NS-AE, IC-AE lesions present a prominent neuronal pSTAT1 signature, accompanied by a high proportion of brain-resident memory CD8 + T cells and neurodegenerative GPNMB + phagocytes which show synaptic engulfment with little C3-complement deposition. Our findings highlight distinct histopathological features of IC-AE compared to NS-AE, providing actionable biomarkers for diagnostics and treatment strategies.
Male, Synapses: immunology, CD8-Positive T-Lymphocytes, Autoantigens, Neurons: immunology, Neurons / pathology, Neuroinflammation, Hashimoto Disease: immunology, Brain: immunology, Encephalitis / metabolism, Humans; Encephalitis/pathology; Encephalitis/immunology; Encephalitis/metabolism; Female; Male; Middle Aged; Neurons/pathology; Neurons/immunology; Neurons/metabolism; Hashimoto Disease/pathology; Hashimoto Disease/immunology; Adult; STAT1 Transcription Factor/metabolism; Synapses/pathology; Synapses/immunology; Synapses/metabolism; Aged; Autoantigens/immunology; Brain/pathology; Brain/immunology; CD8-Positive T-Lymphocytes/immunology; CD8-Positive T-Lymphocytes/pathology; Young Adult; Neurodegeneration; Neuroinflammation; Phagocytes; Resident memory T cells; Synapses, info:eu-repo/classification/ddc/610, Neurons, Phagocytes, Neurons / metabolism, Brain / immunology, Brain / pathology, Autoantigens: immunology, Brain, CD8-Positive T-Lymphocytes: pathology, Synapses: pathology, Middle Aged, CD8-Positive T-Lymphocytes / immunology, STAT1 Transcription Factor, Hashimoto Disease / pathology, STAT1 Transcription Factor / metabolism, Encephalitis, Encephalitis: metabolism, Female, Adult, Neurons: metabolism, Encephalitis / immunology, Resident memory T cells, Hashimoto Disease, 616.07, Autoantigens / immunology, Hashimoto Disease / immunology, Young Adult, Synapses: metabolism, STAT1 Transcription Factor: metabolism, Synapses / immunology, Humans, Encephalitis: immunology, Neurodegeneration, Encephalitis: pathology, Aged, Hashimoto Disease: pathology, Original Paper, Synapses / pathology, CD8-Positive T-Lymphocytes: immunology, Neurodegeneration; Neuroinflammation; Phagocytes; Resident memory T cells; Synapses, Neurons / immunology, Synapses / metabolism, Encephalitis / pathology, Brain: pathology, Neurons: pathology, CD8-Positive T-Lymphocytes / pathology, Synapses
Male, Synapses: immunology, CD8-Positive T-Lymphocytes, Autoantigens, Neurons: immunology, Neurons / pathology, Neuroinflammation, Hashimoto Disease: immunology, Brain: immunology, Encephalitis / metabolism, Humans; Encephalitis/pathology; Encephalitis/immunology; Encephalitis/metabolism; Female; Male; Middle Aged; Neurons/pathology; Neurons/immunology; Neurons/metabolism; Hashimoto Disease/pathology; Hashimoto Disease/immunology; Adult; STAT1 Transcription Factor/metabolism; Synapses/pathology; Synapses/immunology; Synapses/metabolism; Aged; Autoantigens/immunology; Brain/pathology; Brain/immunology; CD8-Positive T-Lymphocytes/immunology; CD8-Positive T-Lymphocytes/pathology; Young Adult; Neurodegeneration; Neuroinflammation; Phagocytes; Resident memory T cells; Synapses, info:eu-repo/classification/ddc/610, Neurons, Phagocytes, Neurons / metabolism, Brain / immunology, Brain / pathology, Autoantigens: immunology, Brain, CD8-Positive T-Lymphocytes: pathology, Synapses: pathology, Middle Aged, CD8-Positive T-Lymphocytes / immunology, STAT1 Transcription Factor, Hashimoto Disease / pathology, STAT1 Transcription Factor / metabolism, Encephalitis, Encephalitis: metabolism, Female, Adult, Neurons: metabolism, Encephalitis / immunology, Resident memory T cells, Hashimoto Disease, 616.07, Autoantigens / immunology, Hashimoto Disease / immunology, Young Adult, Synapses: metabolism, STAT1 Transcription Factor: metabolism, Synapses / immunology, Humans, Encephalitis: immunology, Neurodegeneration, Encephalitis: pathology, Aged, Hashimoto Disease: pathology, Original Paper, Synapses / pathology, CD8-Positive T-Lymphocytes: immunology, Neurodegeneration; Neuroinflammation; Phagocytes; Resident memory T cells; Synapses, Neurons / immunology, Synapses / metabolism, Encephalitis / pathology, Brain: pathology, Neurons: pathology, CD8-Positive T-Lymphocytes / pathology, Synapses
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