Powered by OpenAIRE graph
Found an issue? Give us feedback
image/svg+xml art designer at PLoS, modified by Wikipedia users Nina, Beao, JakobVoss, and AnonMoos Open Access logo, converted into svg, designed by PLoS. This version with transparent background. http://commons.wikimedia.org/wiki/File:Open_Access_logo_PLoS_white.svg art designer at PLoS, modified by Wikipedia users Nina, Beao, JakobVoss, and AnonMoos http://www.plos.org/ Journal of Computers...arrow_drop_down
image/svg+xml art designer at PLoS, modified by Wikipedia users Nina, Beao, JakobVoss, and AnonMoos Open Access logo, converted into svg, designed by PLoS. This version with transparent background. http://commons.wikimedia.org/wiki/File:Open_Access_logo_PLoS_white.svg art designer at PLoS, modified by Wikipedia users Nina, Beao, JakobVoss, and AnonMoos http://www.plos.org/
image/svg+xml art designer at PLoS, modified by Wikipedia users Nina, Beao, JakobVoss, and AnonMoos Open Access logo, converted into svg, designed by PLoS. This version with transparent background. http://commons.wikimedia.org/wiki/File:Open_Access_logo_PLoS_white.svg art designer at PLoS, modified by Wikipedia users Nina, Beao, JakobVoss, and AnonMoos http://www.plos.org/
Journal of Computers for Society
Article . 2024 . Peer-reviewed
Data sources: Crossref
versions View all 2 versions
addClaim

This Research product is the result of merged Research products in OpenAIRE.

You have already added 0 works in your ORCID record related to the merged Research product.

Apache Spark Implementation on Algorithms Boyer-Moore Horspool for Case Studies Internal Transcribed Spacer and Restriction Enzyme

Authors: Zhafirah, Fidela; Hidayat, Topik; Riza, Lala Septem;

Apache Spark Implementation on Algorithms Boyer-Moore Horspool for Case Studies Internal Transcribed Spacer and Restriction Enzyme

Abstract

The huge increase in the amount of data is a problem today. The increase in large amounts of data makes storage very large and processing data becomes very long. Meanwhile, the speed of the process is very necessary to streamline time. This research is dedicated to solving storage and process problems as a big data processing solution by creating a string matching computational model using the Boyer-Moore Horspool algorithm using the Big Data platform, Apache Spark where the Hadoop Distributed File System as data storage on the cluster. In this study, a comparison of string matching process time between stand-alone, the use of Apache Spark single nodes, the use of Apache Spark 3 nodes, 5 nodes, 11 nodes and 16 nodes using Hadoop Distributed File System storage on clusters on Google Cloud Platform. The case study used is bioinformatics by solving two problems in the field of biology, namely the search for motives related to determining the group of flowering plants with other plant groups and the search for motives as detection of begomovirous symptoms as the cause of curly leaf disease. In the results of the study, insignificant time was obtained because the data used could still be processed by classical programs so that the execution time was not much different. The accuracy of the program run on Apache Spark is 83.5%.

Keywords

Apache Spark; Big data; Bioinformatics

  • BIP!
    Impact byBIP!
    selected citations
    These citations are derived from selected sources.
    This is an alternative to the "Influence" indicator, which also reflects the overall/total impact of an article in the research community at large, based on the underlying citation network (diachronically).
    0
    popularity
    This indicator reflects the "current" impact/attention (the "hype") of an article in the research community at large, based on the underlying citation network.
    Average
    influence
    This indicator reflects the overall/total impact of an article in the research community at large, based on the underlying citation network (diachronically).
    Average
    impulse
    This indicator reflects the initial momentum of an article directly after its publication, based on the underlying citation network.
    Average
Powered by OpenAIRE graph
Found an issue? Give us feedback
selected citations
These citations are derived from selected sources.
This is an alternative to the "Influence" indicator, which also reflects the overall/total impact of an article in the research community at large, based on the underlying citation network (diachronically).
BIP!Citations provided by BIP!
popularity
This indicator reflects the "current" impact/attention (the "hype") of an article in the research community at large, based on the underlying citation network.
BIP!Popularity provided by BIP!
influence
This indicator reflects the overall/total impact of an article in the research community at large, based on the underlying citation network (diachronically).
BIP!Influence provided by BIP!
impulse
This indicator reflects the initial momentum of an article directly after its publication, based on the underlying citation network.
BIP!Impulse provided by BIP!
0
Average
Average
Average
gold