A well-balanced second-order finite volume scheme is proposed and analyzed for a 2 X 2 system of non-linear partial differential equations which describes the dynamics of growing sandpiles created by a vertical source on a flat, bounded rectangular table in multiple dimensions. To derive a second-order scheme, we combine a MUSCL type spatial reconstruction with strong stability preserving Runge-Kutta time stepping method. The resulting scheme is ensured to be well-balanced through a modified limiting approach that allows the scheme to reduce to well-balanced first-order scheme near the steady state while maintaining the second-order accuracy away from it. The well-balanced property of the scheme is proven analytically in one dimension and demonstrated numerically in two dimensions. Additionally, numerical experiments reveal that the second-order scheme reduces finite time oscillations, takes fewer time iterations for achieving the steady state and gives sharper resolutions of the physical structure of the sandpile, as compared to the existing first-order schemes of the literature.