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handle: 10261/374801
(A) Binding of peptide 1 and 2 to heterologously expressed AliD as analyzed by microscale thermophoresis (MST). The concentration of NHS-RED-labeled AliD was kept constant (20 nM), while the concentration of the non-labeled peptides ranged between 7.63x10-6–0.125 mM. Samples were measured using the Monolith NT.115 (NanoTemper Technologies) at 40% LED power and medium MST power at 25° C. The Kd was calculated from three independent measurements, error bars represent the standard deviation. (B) Structural superposition of the two peptide 1 molecules (depicted as capped sticks) bound to AliD monomers A (gray) and B (yellow). The sequence of peptide 1 (FPPQSV) is indicated and numbered. N-term, amino-terminus; C-term, C-terminus. (C) Atomic B factors for peptide 1 as observed in the AliD:peptide 1 complex (monomer B). The Ligand is represented as capped sticks and colored based on the B-factor distribution, ranging from low (blue) to high (red) values. (D) Electron-density map (2mFo-DFc map contoured at 1.0 σ) for each of the two peptide 1 molecules (in green caped sticks) observed in the AliD:peptide 1 complex. The position of each peptide residue is numbered.
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Ami transporter system, Wide range, Structural analysis, Invasive infections, Energy balance, Silico modelling, Unexpected remarkable promiscuity, Cell surface, Multiple crystallographic structures, Mass spectrometry analysis, Ensure sufficient uptake, Uptake mechanism, Becomes indispensable, Structural basis, Shedding light, div >< p, Oligopeptide binding, Abc transporters, Diverse peptide specificities, Closed conformations along, Cellular cytoplasm, Streptococcus pneumoniae </, >, displaying affinity, Auxotrophic nature, Oligopeptides demonstrates, Substantial array, Produced de novo, Oligopeptide recognition, Transport systems, Escherichia coli </, Pneumococci, Binding cassette, Abc transporter channel, Certain amino acids, Four proteins building, Vivo implications, Orchestrating oligopeptide uptake
Ami transporter system, Wide range, Structural analysis, Invasive infections, Energy balance, Silico modelling, Unexpected remarkable promiscuity, Cell surface, Multiple crystallographic structures, Mass spectrometry analysis, Ensure sufficient uptake, Uptake mechanism, Becomes indispensable, Structural basis, Shedding light, div >< p, Oligopeptide binding, Abc transporters, Diverse peptide specificities, Closed conformations along, Cellular cytoplasm, Streptococcus pneumoniae </, >, displaying affinity, Auxotrophic nature, Oligopeptides demonstrates, Substantial array, Produced de novo, Oligopeptide recognition, Transport systems, Escherichia coli </, Pneumococci, Binding cassette, Abc transporter channel, Certain amino acids, Four proteins building, Vivo implications, Orchestrating oligopeptide uptake
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