CAMIARKQuikr 1.0.0 taxonomic profiling of the CAMI 2 Mouse Gut Toy data set, samples 0-63

Software: CAMIARKQuikrSoftwareVersion: 1.0.0DataURL: https://data.cami-challenge.org/participateSoftwareURL: https://doi.org/10.5281/zenodo.1730572DockerImage: stefanjanssen/docker_profiling_tools:quickrIsBiobox: TrueBioboxYAMLFile: https://zenodo.org/record/3629567/files/biobox.yaml?download=1ReferenceDatabase: https://doi.org/10.5281/zenodo.1730572ShortReadsUsed: TrueLongReadsUsed: FalseCommandsUsed: docker run \--volume="/path/to/19122017_mousegut_scaffolds_yaml:/bbx/mnt/yaml:ro" \--volume="/path/to/19122017_mousegut_scaffolds:/bbx/mnt/input:ro" \--volume="/path/to/output:/bbx/mnt/output:rw" \--volume="/path/to/output/metadata:/bbx/metadata:rw" \--volume="/path/to/output/cache:/cache:rw" \stefanjanssen/docker_profiling_tools:quickr

Related Organizations

Helmholtz Association of German Research Centres
Germany
Helmholtz Center for Information Security
Germany
Helmholtz Zentrum München
Germany

Keywords

metagenomics, CAMI 2 Mouse Gut Toy data set, taxonomic profiling

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