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Dataset . 2026
License: CC BY NC
Data sources: ZENODO
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Cytomove: validation data, figures, and analysis artifacts for a browser-local scratch wound healing assay quantification workflow

Authors: Duzgun, Zekeriya;

Cytomove: validation data, figures, and analysis artifacts for a browser-local scratch wound healing assay quantification workflow

Abstract

Supporting validation artifacts for the Cytomove preprint, a browser-local and reviewable workflow for scratch wound healing assay quantification. This deposit provides the frozen numerical source of truth, input provenance, author-acquired phone images, intermediate measurement outputs, and figures used in the manuscript so that the reported Cytomove-versus-WHST comparison can be inspected and reproduced. Contents: validation_master.xlsx — paired WHST and Cytomove per-frame measurements, dataset-level diagnostic statistics, discrepancy-resolution table, and manuscript notes across five image sets (csma_sample_11, whad_mcf7_11, cell_phone_HK/M8F/MK; 31 paired measurements). selected_input_manifest.csv — per-frame provenance for the 31 validation measurements, including selected file identifiers, source dataset/origin, redistribution status, license/rights notes, and derived-output locations. input_images/author_phone/ — the 9 author-acquired smartphone-through-eyepiece raw JPG images used in the phone validation sets. derived_outputs/ — frozen Cytomove group-metric exports and WHST/CSMA comparison workbooks used to build the paired validation summary. figures/ — current v2 validation and manuscript figures generated from the validation workflow (Figure 1, Figure 2, Figure 3, Figure 4, Figure 5, Figure 6, and Supplementary Figure S1). deposit_file_manifest.csv — file-level deposit manifest with size and SHA-256 checksum. Image provenance: WHAD-MCF7 phase-contrast source images were derived from the WHAD/CAMAD dataset (Iheme et al., 2024, Zenodo, CC BY 4.0, doi:10.5281/zenodo.12806149). CSMA sample images and output context were derived from the public CSMA WoundHealing repository and the associated publication (Pham et al., 2025, IEEE Access, doi:10.1109/ACCESS.2025.3561607). Smartphone-through-eyepiece brightfield images were acquired by the author from established cell-line cultures. Raw third-party WHAD/CAMAD and CSMA image archives are not redistributed here; exact selected third-party frame identifiers are provided in selected_input_manifest.csv, and readers should obtain raw third-party images from their original sources under their own licenses. The Cytomove project repository is maintained at https://github.com/zduzgun/CytoMove and a live web version is available at https://cytomove.com . The manuscript is submitted separately as a preprint and is not included in this lean reproducibility package.

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    influence
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    impulse
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selected citations
These citations are derived from selected sources.
This is an alternative to the "Influence" indicator, which also reflects the overall/total impact of an article in the research community at large, based on the underlying citation network (diachronically).
BIP!Citations provided by BIP!
popularity
This indicator reflects the "current" impact/attention (the "hype") of an article in the research community at large, based on the underlying citation network.
BIP!Popularity provided by BIP!
influence
This indicator reflects the overall/total impact of an article in the research community at large, based on the underlying citation network (diachronically).
BIP!Influence provided by BIP!
impulse
This indicator reflects the initial momentum of an article directly after its publication, based on the underlying citation network.
BIP!Impulse provided by BIP!
0
Average
Average
Average