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ZENODO
Dataset . 2025
Data sources: ZENODO
ZENODO
Dataset . 2025
Data sources: Datacite
ZENODO
Dataset . 2025
Data sources: Datacite
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Supplemental Material for "The EPS-I exopolysaccharide transforms Ralstonia wilt pathogen biofilms into viscoelastic fluids for rapid dissemination in planta."

Authors: Konkel, Zachary; Cope-Arguello, Matthew; Manikantan, Harishankar; Lowe-Power, Tiffany;

Supplemental Material for "The EPS-I exopolysaccharide transforms Ralstonia wilt pathogen biofilms into viscoelastic fluids for rapid dissemination in planta."

Abstract

Explanation of Files cblaster output - RSSC eps cluster.zip - One of the evolutionary analyses for genomes containing clusters like the RSSC eps cluster RSSC Biofilm Mobility.zip - Quantitative Tilt Assay Image Set measuring "biofilm mobility" with its paired Cell Profiler image analysis pipeline NonRSSC Biofilm Mobility.zip - Full image set of biofilms grown either on a flat or angled surface to measure "biofilm mobility" of NonRSSC biofilms Colony Size and Population Density.zip - Quantitative Colony size image set with its paired Cell Profiler image analysis pipeline, as well as CFU/colony data sheets Individual Colony Mobility.zip - Qualitative image set of individual colonies grown on either a flat or tilted surface to visualize biofilm mobility Rheometry data.zip - Full rheology dataset with paired metadata for each sample measured: cfu/mL, and moisture content Growth curve.zip - Growth curve data in .xlsx format exported from Agilent Biotek Gen5 Software (with additional tabs for data labelling and organization) Plant Colonization Assay.zip - Excel spreadsheet with the cfu/g measurments for the in planta colonization assay Microfluidics Images.zip - Complete image sets of all microfluidics channels and trials, as well as a .pdf file outlining the process of quantifying the biofilm coverage Rheology Sample Examples - Image set of examples of colony biofilm samples used for rheology experiments Moisture content measurement repeat.zip - Moisture content measurements were repeated for GMI1000 wild type and GMI1000 ΔepsB to more directly measure differences between the strains eps_phylogenetic_synteny_analysis.zip - The input and output files for the Cluster Reconstruction and Phylogenetic Analysis Pipeline (CRAP) eps&nucAB cluster BlastP analysis.zip - This file contains the link to the kbase narrative which contains all of the search settings and results for figure 4B and S12

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selected citations
These citations are derived from selected sources.
This is an alternative to the "Influence" indicator, which also reflects the overall/total impact of an article in the research community at large, based on the underlying citation network (diachronically).
BIP!Citations provided by BIP!
popularity
This indicator reflects the "current" impact/attention (the "hype") of an article in the research community at large, based on the underlying citation network.
BIP!Popularity provided by BIP!
influence
This indicator reflects the overall/total impact of an article in the research community at large, based on the underlying citation network (diachronically).
BIP!Influence provided by BIP!
impulse
This indicator reflects the initial momentum of an article directly after its publication, based on the underlying citation network.
BIP!Impulse provided by BIP!
0
Average
Average
Average