software . 2017

Segmentator v1.3.0

Gulban, Omer Faruk; Schneider, Marian;
Open Source
  • Published: 29 Sep 2017
  • Publisher: Zenodo
Abstract
<p>Segmentator is a free and open-source package for multi-dimensional data exploration and segmentation for 3D images. This application is mainly developed and tested using ultra-high field magnetic resonance imaging (MRI) brain data.</p> <p><strong>Changes in this version:</strong></p> <p>For users:</p> <ul> <li>New gradient magnitude operators added (Scharr, Sobel, Prewitt).</li> <li>The default gradient magnitude calculation is switched to 3D Scharr.</li> <li>Switched to Matplotlib 2.0 (Matplotlib 1.5.3 is not compatible anymore).</li> <li>Rotation button added.</li> <li>New options in the command line interface.</li> <li>Small improvements in N-cut pipeline...
Subjects
free text keywords: segmentation, Magnetic resonance imaging, Biophysics, Biochemistry, Cell Biology, Genetics, Neuroscience, Developmental Biology, Science Policy, 111714 Mental Health, Plant Biology, 69999 Biological Sciences not elsewhere classified
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Zenodo
Software . 2017
Provider: Datacite
figshare
Software . 2017
Provider: figshare
Zenodo
Software . 2017
Provider: Zenodo
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software . 2017

Segmentator v1.3.0

Gulban, Omer Faruk; Schneider, Marian;