Name: Percentage homology calculation between two sequences
Creator: Moose, Anony
Keywords: awk

Percentage homology calculation between two sequences

Software UNKNOWN

Moose, Anony;

(2017)

Publisher: Figshare

Related identifiers: doi: 10.6084/m9.figshare.4577965.v1
Subject: awk
- FOR: 80301 Bioinformatics Software

This AWK code calculates the sum of the non-overlapping lengths of high-scoring pairs (HSPs) between each query and<br>reference sequence in a BLAST file (-outfmt "6 std qlen slen").

Related Research Results (1)
Inferred by OpenAIRE
publication
Phylogenomics and comparative genomics of Lactobacillus salivarius, a mammalian gut commensal (2017)
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