De-Kupl: Exhaustive Capture Of Biological Variation In Rna-Seq Data Through K-Mer Decomposition

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AUDOUX Jérôme; PHILIPPE Nicolas; CHIKHI Rayan; SALSON Mikael; GALLOPIN Melina; GABRIEL Marc; LE COZ Jeremie; DROUINEAU Emilie; COMMES Therese; GAUTHERET Daniel;
(2017)

<p>DE-kupl is a computational protocol that aims to capture all k-mer variation in an input set of RNA-seq libraries. This protocol is composed of four main components :</p> <ul> <li>Indexing: index and count all k-mers (k=31) in the input libraries</li> <li... View more
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