pyPaSWAS

Software OPEN SOURCE
Warris, Sven; Timal, Roshan;
(2016)
  • Publisher: Zenodo
  • Identifiers: doi: 10.5281/zenodo.51155
  • Subject: OpenCL | Space Science | CUDA | sequence alignment | Smith-Waterman | GPGPU
    • FOR: 80699 Information Systems not elsewhere classified | 69999 Biological Sciences not elsewhere classified | 39999 Chemical Sciences not elsewhere classified
    acm: ComputerSystemsOrganization_PROCESSORARCHITECTURES | Hardware_ARITHMETICANDLOGICSTRUCTURES

<p>Python-based Parallel Smith-Waterman Alignment Software. It uses pyCUDA and pyOpenCL to perform the aligments on CPUs, GPUs and XeonPhis</p>
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