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FUNDING SOURCES: 1U01DA055371 Wilson (PI) 09/01/21 – 08/31/26 17/24 The Healthy Brain and Child Development National Consortium | U24 DA055330 Smyser (PI) 09/30/21 – 06/30/26 Healthy brain and child development national consortium data coordinating center | Sub 1016803_ UMINN/U01DA041148 Fair & Nagel (PI) 04/15/20 – 03/31/27 ABCD-USA CONSORTIUM: RESEARCH PROJECT SITE AT OHSU | UG3 OD023349 Fair (Co-PI) 09/21/16–08/31/23 Pre- and Postnatal Exposure Periods for Child Health: Common Risks and Shared Mechanisms | 1R37MH125829-01 Fair, Satterwaithe (PI) 09/01/21 – 03/31/26 Precision mapping of individualized executive networks in youth | 2R01MH096773-08A1 Fair & Dosenbach (PI) 06/05/20– 03/31/25 Identification of outcome-based sub-populations using deep phenotyping and precision functional mapping across ADHD and ASD | Note: Audrey Houghton and Greg Conan are co-first authors for this project

This BIDS App provides the utility of creating a nnU-Net anatomical MRI segmentation and mask with a infant brain trained model for the purposes of circumventing JLF within Nibabies. This application utilities the following software: nvidia/pytorch:21.11-py3, nnU-Net, SynthSeg, FSL v6.0.5.1, ANTS v2.3.3, BIBSnet v1.0.0