software . 2021

nf-core/eager: [2.3.3] - Aalen (Patch) - 2021-04-08

Yates, James A. Fellows; Peltzer, Alexander; Thiseas C. Lamnidis; Borry, Maxime; ZandraFagernas; Bar, Ido; Valtueña, Aida Andrades; Alexandregilardet; Nf-Core Bot; Garcia, Maxime U.; ...
Open Source
  • Published: 01 Jan 2021
  • Publisher: Zenodo
Abstract
Added #687 - Adds Kraken2 unique kmer counting report #676 - Refactor help message / summary message formatting to automatic versions using nf-core library #682 - Add AdapterRemoval --qualitymax flag to allow FASTQ Phred score range max more than 41 Fixed #666 - Fixed input file staging for print_nuclear_contamination #631 - Update minimum Nextflow version to 20.07.1, due to unfortunate bug in Nextflow 20.04.1 causing eager to crash if patch pulled Made MultiQC crash behaviour stricter when dealing with large datasets, as reported by @ashildv #652 - Added note to documentation that when using --skip_collapse this will use paired-end alignment mode with mapper...
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Open Access
Zenodo
Software . 2021
Provider: Datacite
Open Access
Zenodo
Software . 2021
Provider: Datacite
Open Access
Zenodo
Software . 2021
Provider: Datacite
Open Access
Zenodo
Software . 2021
Provider: Datacite
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