software . 2020

cosanlab/nltools: 0.4.0

Luke Chang; Sam; Eshin Jolly; Jin Hyun Cheong; Anton Burnashev; Andy Chen; Marissa Clark; Seth Frey;
Open Access
  • Published: 01 Jul 2020
  • Publisher: Zenodo
Abstract
New Functionality Added new intersubject correlation (ISC) functionality. ISC function in stats module can compute different types of resampling tests (i.e., circular shifting, phase randomization, subject-wise bootstrapping. ISC method on Adjacency Class can perform subject-wise bootstrapping. Added new intersubject functional connectivity (ISFC) functionality. Uses leave-one-subject out averaging method. Added new dynamic intersubject phase synchrony (ISPS) functionality. Calculate length of average resultant vector, significance computed with parametric Rayleigh test. roi_to_brain is now much faster when using arrays. Added new timeseries permutation methods to correlation_permutation function (circle shifting and phase randomization) Brain_Data has a new temporal_resample method to up and downsample timeseries Bug Fixes fixed smoothing bug temporary fix to plotting bug. due to change to matlotlib api, colorbars on brain_data plots are not working correctly. Turned them off by default for now. no longer pinning joblib to old version Refactoring updated and refactored align code. Deprecated/Removed Removed jackknife permutation method as we decided it wasn't working as we intended.
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ZENODO
Software . 2020
Providers: ZENODO
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