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Research software . Software . 2015

gene-ontology: Initial zenodo release

Daniel Himmelstein; Casey Greene; Venkat Malladi; Frederic Bastian; Sergio Baranzini;
Open Access  
Published: 28 Jul 2015
Publisher: Zenodo
Abstract
This project provides easy-to-use Gene Ontology annotations. Annotations relate GO Terms with Entrez Genes. We provide genes as Entrez GeneIDs and as symbols. Users choose from the following options: species: which species to retrieve annotations for evidence: whether to use all annotations or annotations from experimental evidence only propagation: whether to include only direct annotations or infer annotations based on ontology structure The project includes a website for browsing and downloading annotation files.
Subjects by Vocabulary

ACM Computing Classification System: ComputingMethodologies_GENERAL GeneralLiterature_REFERENCE(e.g.,dictionaries,encyclopedias,glossaries)

Subjects

Gene Ontology, Annotations, Ontologies, Propagation, Rephetio

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ZENODO
Software . 2015
Providers: ZENODO