software . 2019

Software for paper: Two is better than one: Studying host plant/fungal compatibility by using a hybrid pathogen

Bosch, Jason;
Open Source
  • Published: 01 Jan 2019
  • Publisher: Figshare
Abstract
<p>These files represent software I developed as part of the publication: Two is better than one: Studying host plant/fungal compatibility by using a hybrid pathogen.</p> <p>One file is an installer for a CLC workflow which take NGS data from fungal hybrids and assigns the reads that either come (1) specifically from <em>U. bromivora</em> or (2) from either <em>U. hordei</em> or are shared between <em>U. hordei</em> and <em>U. bromivora.</em></p> <p>The other file contains the Bash and R scripts that I used to a make a table comparing how much of each hybrid strain&#39;s genome came from either <em>U. bromivora </em>or <em>U. hordei.</em>This also let me evaluat...
Subjects
free text keywords: Microbiology, Cell Biology, Genetics, Molecular Biology, Neuroscience, Pharmacology, Biotechnology, Evolutionary Biology, Ecology, Immunology, Developmental Biology, Marine Biology, Cancer, Inorganic Chemistry, Science Policy, 111714 Mental Health, 110309 Infectious Diseases, Plant Biology, 60506 Virology, CLC workflow, NGS data, hordei, pathogen, host, R scripts, compatibility, bromivora, Mental Health, Infectious Diseases, Virology
Communities
Science and Innovation Policy Studies
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Software . 2019
Provider: figshare
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Software . 2019
Provider: Zenodo
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Software . 2019
Provider: Datacite
Zenodo
Software . 2019
Provider: Datacite
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