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ZENODO
Dataset . 2023
License: CC BY
Data sources: Datacite
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ZENODO
Dataset . 2023
License: CC BY
Data sources: Datacite
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Datasets for Out-of-KB Mention Discovery with Entity Linking

Authors: Dong, Hang; Chen, Jiaoyan; He, Yuan; Yinan, Liu; Horrocks, Ian;

Datasets for Out-of-KB Mention Discovery with Entity Linking

Abstract

The repository contains datasets for out-of-KB mention discovery from texts, documented in the work, Reveal the Unknown: Out-of-Knowledge-Base Mention Discovery with Entity Linking, on arXiv: https://arxiv.org/abs/2302.07189 (CIKM 2023). Each data setting (as a sub-folder) contains train, valid, and test files and also 100 random sample files for each data split for debugging. Data folder names with “syn_full” at the end are synonym augmented data (each synonym as an entity) for the setting. Ontology .jsonl files have two versions for each, "syn_attr" setting treats synonyms are attributes, "syn_full" setting treats synonyms as entities. Data scripts are available at https://github.com/KRR-Oxford/BLINKout#data-scripts Acknowledgement of the data sources below: ShARe/CLEF 2013 dataset is from https://physionet.org/content/shareclefehealth2013/1.0/ MedMention dataset is from https://github.com/chanzuckerberg/MedMentions UMLS (versions 2012AB, 2014AB, 2017AA) is from https://www.nlm.nih.gov/research/umls/index.html SNOMED CT (corresponding versions) is from https://www.nlm.nih.gov/healthit/snomedct/index.html NILK dataset is from https://zenodo.org/record/6607514 WikiData 2017 dump is from https://archive.org/download/enwiki-20170220/enwiki-20170220-pages-articles.xml.bz2

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Keywords

ontology enrichment, out-of-KB mentions, entity linking, biomedical ontologies

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This is an alternative to the "Influence" indicator, which also reflects the overall/total impact of an article in the research community at large, based on the underlying citation network (diachronically).
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popularity
This indicator reflects the "current" impact/attention (the "hype") of an article in the research community at large, based on the underlying citation network.
BIP!Popularity provided by BIP!
influence
This indicator reflects the overall/total impact of an article in the research community at large, based on the underlying citation network (diachronically).
BIP!Influence provided by BIP!
impulse
This indicator reflects the initial momentum of an article directly after its publication, based on the underlying citation network.
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