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ZENODO
Dataset . 2022
License: CC BY
Data sources: Datacite
image/svg+xml art designer at PLoS, modified by Wikipedia users Nina, Beao, JakobVoss, and AnonMoos Open Access logo, converted into svg, designed by PLoS. This version with transparent background. http://commons.wikimedia.org/wiki/File:Open_Access_logo_PLoS_white.svg art designer at PLoS, modified by Wikipedia users Nina, Beao, JakobVoss, and AnonMoos http://www.plos.org/
ZENODO
Dataset . 2022
License: CC BY
Data sources: Datacite
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16S rRNA sequencing gene datasets for CRC data

Research datakeyboard_double_arrow_right Dataset 30 Nov 2022Publisher:Zenodo
Authors: Marcos-Zambrano, Laura Judith;

doi: 10.5281/zenodo.7382813 , 10.5281/zenodo.7382814

16S rRNA sequencing gene datasets for CRC data

Abstract

Used datasets: Dataset 16S rRNA Region Control (n) Adenoma (n) CRC (n) Available metadata Baxter V4 171 198 120 Gender, age, weight, height, BMI, country, race Zackular V4 30 30 30 Gender, age, weight, height, BMI, country, race, FOBT, medication Zeller V4 50 38 41 Gender, age, BMI, country, FOBT TOTAL V4 251 266 191 All of the above Data processing & sharing All datasets were processed using qiime2 pipeline with DADA2 for Sequence quality control and feature table construction and SILVA database for taxonomic assignment, and then a phyloseq object was constructed. Abundance table at genus level is in file genus.csv (Sample counts with NO filtering). Clean metadata is in metadata.csv file (Countries: CA - Canada. USA - United States of America. FRA - France.) Phyloseq object is in file physeq.RDS (Saved as an RDS object in R) More information is here.

Keywords

metataxonomy, 16S rRNA gene, CRC, adenoma

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selected citations
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This is an alternative to the "Influence" indicator, which also reflects the overall/total impact of an article in the research community at large, based on the underlying citation network (diachronically).
BIP!Citations provided by BIP!
popularity
This indicator reflects the "current" impact/attention (the "hype") of an article in the research community at large, based on the underlying citation network.
BIP!Popularity provided by BIP!
influence
This indicator reflects the overall/total impact of an article in the research community at large, based on the underlying citation network (diachronically).
BIP!Influence provided by BIP!
impulse
This indicator reflects the initial momentum of an article directly after its publication, based on the underlying citation network.
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