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Software . 2026
Data sources: Datacite
ZENODO
Software . 2026
Data sources: Datacite
ZENODO
Software . 2026
Data sources: Datacite
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danforthcenter/plantcv: PlantCV v5.0.0rc1

Authors: Noah Fahlgren; Haley Schuhl; Malia Gehan; Hudanyun Sheng; Josh Sumner; Jorge Gutierrez; KeelyBrown; +21 Authors

danforthcenter/plantcv: PlantCV v5.0.0rc1

Abstract

What's Changed rename input to img in pcv.spectral_index.egi by @HaleySchuhl in https://github.com/danforthcenter/plantcv/pull/1793 Remove time lapse switch to opencv headless by @nfahlgren in https://github.com/danforthcenter/plantcv/pull/1834 Removed label param detect_color_card by @JalissaPirro in https://github.com/danforthcenter/plantcv/pull/1830 Removed label parameter from auto_correct_color function by @Sam-Taylor-UIOWA in https://github.com/danforthcenter/plantcv/pull/1831 Removed find_color_card by @marcusdgriff in https://github.com/danforthcenter/plantcv/pull/1832 Use main opencv package headless build by @nfahlgren in https://github.com/danforthcenter/plantcv/pull/1835 Remove label from report size marker area by @nfahlgren in https://github.com/danforthcenter/plantcv/pull/1829 Add higher order auto_correct_color for non-linear by @HaleySchuhl in https://github.com/danforthcenter/plantcv/pull/1797 Jupyter parallelization by @joshqsumner in https://github.com/danforthcenter/plantcv/pull/1803 Add support for astrobotany color calibration stickers by @NMiklave in https://github.com/danforthcenter/plantcv/pull/1819 Color correction scatterplot by @joshqsumner in https://github.com/danforthcenter/plantcv/pull/1759 Boxpoints bug by @joshqsumner in https://github.com/danforthcenter/plantcv/pull/1871 Parallel checkpointing by @joshqsumner in https://github.com/danforthcenter/plantcv/pull/1810 Parallel verbosity by @joshqsumner in https://github.com/danforthcenter/plantcv/pull/1813 Change to workflowconfig json attribute name by @joshqsumner in https://github.com/danforthcenter/plantcv/pull/1821 Update algorithm to crop and unwarp card in detect_color_card by @HaleySchuhl in https://github.com/danforthcenter/plantcv/pull/1795 Add GFP, RFP, APH support for read_cropreporter by @marcusdgriff in https://github.com/danforthcenter/plantcv/pull/1865 Image sharpening by @joshqsumner in https://github.com/danforthcenter/plantcv/pull/1825 Params verbosity by @joshqsumner in https://github.com/danforthcenter/plantcv/pull/1827 Remove utils module by @joshqsumner in https://github.com/danforthcenter/plantcv/pull/1839 Rename filepath to dir by @joshqsumner in https://github.com/danforthcenter/plantcv/pull/1840 Process results in series by @joshqsumner in https://github.com/danforthcenter/plantcv/pull/1843 Tuple to single value traits by @joshqsumner in https://github.com/danforthcenter/plantcv/pull/1846 Exclude plot image by @joshqsumner in https://github.com/danforthcenter/plantcv/pull/1848 Parallelization doc options simplification by @joshqsumner in https://github.com/danforthcenter/plantcv/pull/1849 Camel case jupyterconfig by @joshqsumner in https://github.com/danforthcenter/plantcv/pull/1858 Conserve pheno metadata by @joshqsumner in https://github.com/danforthcenter/plantcv/pull/1868 Nested logs directories by @joshqsumner in https://github.com/danforthcenter/plantcv/pull/1873 Parallel get env by @joshqsumner in https://github.com/danforthcenter/plantcv/pull/1874 Updating color card detection method by @joshqsumner in https://github.com/danforthcenter/plantcv/pull/1879 1885 mask list to single labeled mask by @maliagehan in https://github.com/danforthcenter/plantcv/pull/1887 1862 import pam time files by @kmurphy61 in https://github.com/danforthcenter/plantcv/pull/1884 1862 chlorophyll image import by @kmurphy61 in https://github.com/danforthcenter/plantcv/pull/1894 Handle checkpointed workflows that fail entirely by @joshqsumner in https://github.com/danforthcenter/plantcv/pull/1883 Ignore hidden in parallel by @joshqsumner in https://github.com/danforthcenter/plantcv/pull/1897 Additional spectral indices by @marcusdgriff in https://github.com/danforthcenter/plantcv/pull/1893 Update link in supported color cards docs by @NMiklave in https://github.com/danforthcenter/plantcv/pull/1900 1902 skimage change min size by @k034b363 in https://github.com/danforthcenter/plantcv/pull/1904 fix _find_closest in hyperspectral by @k034b363 in https://github.com/danforthcenter/plantcv/pull/1909 Conda only on unix like by @joshqsumner in https://github.com/danforthcenter/plantcv/pull/1914 Only test conda prologue on unix by @joshqsumner in https://github.com/danforthcenter/plantcv/pull/1915 New Contributors @JalissaPirro made their first contribution in https://github.com/danforthcenter/plantcv/pull/1830 @Sam-Taylor-UIOWA made their first contribution in https://github.com/danforthcenter/plantcv/pull/1831 @marcusdgriff made their first contribution in https://github.com/danforthcenter/plantcv/pull/1832 Full Changelog: https://github.com/danforthcenter/plantcv/compare/v4.11...v5.0.0rc1

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selected citations
These citations are derived from selected sources.
This is an alternative to the "Influence" indicator, which also reflects the overall/total impact of an article in the research community at large, based on the underlying citation network (diachronically).
BIP!Citations provided by BIP!
popularity
This indicator reflects the "current" impact/attention (the "hype") of an article in the research community at large, based on the underlying citation network.
BIP!Popularity provided by BIP!
influence
This indicator reflects the overall/total impact of an article in the research community at large, based on the underlying citation network (diachronically).
BIP!Influence provided by BIP!
impulse
This indicator reflects the initial momentum of an article directly after its publication, based on the underlying citation network.
BIP!Impulse provided by BIP!
0
Average
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Average