Platinum Tandem Repeats

Annotation of tandem repeat loci in the human genome ~7.8 million loci: STRs and VNTRs Minimum locus size 10 bp Maximum locus size 10,000 bp Loci within 50 bp are merged to produce compound/complex loci CHM13-T2T and GRCh38 genomes TRGT locus definitions and bed files Generated using Tandem Repeats Finder and tr-solve For more details and the code used to generate the loci, see: https://github.com/dashnowlab/PlatinumTRs This data was used to call tandem repeat genotypes using TRGT by the Platinum Pedigree Consortium.

Related Organizations

University of Utah
United States
University of Colorado Anschutz Medical Campus
United States

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NIH| Revealing new short tandem repeat variation in the human population across sequencing technologies: towards rare disease diagnosis and discovery