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Sample datasets for Transposon insertion sequencing analysis tutorial

Name: Sample datasets for Transposon insertion sequencing analysis tutorial
Keywords: Staphylococcus aureus, Galaxy Training Material, TnSeq

Research datakeyboard_double_arrow_right Dataset 27 Feb 2019Zenodo

Authors: Lariviere, Delphine; Nekrutenko, Anton;

doi: 10.5281/zenodo.2579334 , 10.5281/zenodo.2579335

Sample datasets for Transposon insertion sequencing analysis tutorial

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Abstract

The dataset contains five files: Tnseq-Tutorial-reads.fastqsanger.gz - A subset of TnSeq reads published in `Santiago, M., Matano, L. M., Moussa, S. H., Gilmore, M. S., Walker, S., & Meredith, T. C. (2015). A new platform for ultra-high density Staphylococcus aureus transposon libraries. BMC Genomics, 16(1), 1–18. http://doi.org/10.1186/s12864-015-1361-3` condition_barcodes.fasta - Set of barcodes to separate reads from different experimental conditions construct_barcodes.fasta - Set of barcodes to separate reads from different transposon constructs staph_aur.fasta : Genome file for Staphylococcus aureus staph_aur.fasta : Annotation file for Staphylococcus aureus

Keywords

Staphylococcus aureus, Galaxy Training Material, TnSeq

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Impact byBIP!

	citations This is an alternative to the "Influence" indicator, which also reflects the overall/total impact of an article in the research community at large, based on the underlying citation network (diachronically).	0
	popularity This indicator reflects the "current" impact/attention (the "hype") of an article in the research community at large, based on the underlying citation network.	Average
	influence This indicator reflects the overall/total impact of an article in the research community at large, based on the underlying citation network (diachronically).	Average
	impulse This indicator reflects the initial momentum of an article directly after its publication, based on the underlying citation network.	Average

Usage byUsageCounts

visibility	views	9K
download	downloads	969

	citations This is an alternative to the "Influence" indicator, which also reflects the overall/total impact of an article in the research community at large, based on the underlying citation network (diachronically).	0
	popularity This indicator reflects the "current" impact/attention (the "hype") of an article in the research community at large, based on the underlying citation network.	Average
	influence This indicator reflects the overall/total impact of an article in the research community at large, based on the underlying citation network (diachronically).	Average
	impulse This indicator reflects the initial momentum of an article directly after its publication, based on the underlying citation network.	Average