research data . Dataset . 2019

Human-specific tandem repeat expansion and differential gene expression during primate evolution

Sulovari, Arvis; Li, Ruiyang; Audano, Peter; Porubsky, David; Vollger, Mitchell; Logsdon, Glennis; Warren, Wesley; Pollen, Alex; Chaisson, Mark; Eichler, Evan;
Open Access
  • Published: 06 Sep 2019
  • Publisher: Zenodo
Abstract
<p>THIS DATASET IS PART OF THE FOLLOWING STUDY:<br> <a href="https://www.pnas.org/content/early/2019/10/22/1912175116">https://www.pnas.org/content/early/2019/10/22/1912175116</a></p> <p>&nbsp;</p> <p>THE RAW SEQUENCING 10x GENOMICS READS CAN BE DOWNLOADED FROM SRA:<br> <a href="https://www.ncbi.nlm.nih.gov/bioproject/PRJNA593056">https://www.ncbi.nlm.nih.gov/bioproject/PRJNA593056</a></p> <p><br> ORIGINAL UPLOAD: 09/06/2019</p> <p>UPDATES: 10/28/2019; 01/27/2020</p> <p>DESCRIPTION: Contigs were assembled using Phased-SV (<a href="https://www.nature.com/articles/s41467-018-08148-z">Chaisson et al, Nature Communications 2019</a>) on six human haplotypes (i.e., H0...
Subjects
free text keywords: tandem repeats, haplotype-resolved tandem repeat assemblies, STR, VNTR, repeat instability, genome instability, Genetics, Molecular Biology, Pharmacology, Evolutionary Biology, Ecology, Immunology, Cancer, Science Policy, 110309 Infectious Diseases, 60506 Virology, 59999 Environmental Sciences not elsewhere classified, 69999 Biological Sciences not elsewhere classified
Communities
Science and Innovation Policy Studies
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Dataset . 2019
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Dataset . 2019
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Dataset . 2019
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Dataset . 2019
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