publication . Article . Other literature type . 2016

Comparative transcriptomics and proteomics of three different aphid species identifies core and diverse effector sets

Thorpe, Peter; Cock, Peter J A; Bos, Jorunn;
Open Access
  • Published: 02 Mar 2016 Journal: BMC Genomics, volume 17 (eissn: 1471-2164, Copyright policy)
  • Publisher: Springer Science and Business Media LLC
  • Country: United States
Abstract
Background Aphids are phloem-feeding insects that cause significant economic losses to agriculture worldwide. While feeding and probing these insects deliver molecules, called effectors, inside their host to enable infestation. The identification and characterization of these effectors from different species that vary in their host range is an important step in understanding the infestation success of aphids and aphid host range variation. This study employs a multi-disciplinary approach based on transcriptome sequencing and proteomics to identify and compare effector candidates from the broad host range aphid Myzus persicae (green peach aphid) (genotypes O, J a...
Subjects
Medical Subject Headings: food and beveragesbiochemical phenomena, metabolism, and nutrition
free text keywords: QH301 Biology, DAS, QH301, Host (biology), RNA-Seq, Rhopalosiphum padi, Genetics, Myzus cerasi, Aphid, biology.organism_classification, biology, Infestation, medicine.disease_cause, medicine, Myzus persicae, Effector, Research Article, Host-range, Proteomics, Biotechnology
Related Organizations
Funded by
EC| APHIDHOST
Project
APHIDHOST
Molecular determinants of aphid host range
  • Funder: European Commission (EC)
  • Project Code: 310190
  • Funding stream: FP7 | SP2 | ERC
79 references, page 1 of 6

1.Blackman R, Eastop V. Aphids on the World’s crops: An identification guide. Chichester. UK: Wiley; 2000. p. 466.

2.Bass C, Puinean AM, Andrews M, Cutler P, Daniels M, Elias J, et al. Mutation of a nicotinic acetylcholine receptor β subunit is associated with resistance to neonicotinoi d insecticides in the aphid Myzus persicae. Bmc Neuroscience. 2011;12(1):51.

3.Edwards OR, Franzmann B, Thackray D, Micic S. Insecticide resistance and implications for future aphid management in Australian grains and pastures: a review. Animal Production Science. 2008;48(12):1523–30.

4.Puinean AM, Foster SP, Oliphant L, Denholm I, Field LM, Millar NS, et al. Amplification of a cytochrome P450 gene is associated with resistance to neonicotinoid insecticides in the aphid Myzus persicae. PLoS Genet. 2010;6(6):e1000999.

Hillocks, R. Farming with fewer pesticides: EU pesticide review and resulting challenges for UK agriculture. Crop Protection. 2012; 31 (1): 85-93 [OpenAIRE] [DOI]

Blackman, RL, Eastop, VF. Aphids on the world’s herbaceous plants and shrubs. 2008

Jaouannet, M, Morris, JA, Hedley, PE, Bos, JIB. Characterization of Arabidopsis Transcriptional Responses to Different Aphid Species Reveals Genes that Contribute to Host Susceptibility and Non-host Resistance. Plos Pathogens. 2015; 11 (5): e1004918 [OpenAIRE] [PubMed] [DOI]

Powell, G, Tosh, CR, Hardie, J. Host plant selection by aphids: behavioral, evolutionary, and applied perspectives. Annu Rev Entomol. 2006; 51: 309-330 [OpenAIRE] [PubMed] [DOI]

Sharma, A, Khan, AN, Subrahmanyam, S, Raman, A, Taylor, GS, Fletcher, MJ. Salivary proteins of plant-feeding hemipteroids – implication in phytophagy. Bulletin of Entomological Research. 2014; 104 (02): 117-136 [PubMed] [DOI]

Atamian, HS, Chaudhary, R, Cin, VD, Bao, E, Girke, T, Kaloshian, I. In planta expression or delivery of potato aphid Macrosiphum euphorbiae effectors Me10 and Me23 enhances aphid fecundity. Molecular Plant-Microbe Interactions. 2013; 26 (1): 67-74 [PubMed] [DOI]

Bos, JI, Prince, D, Pitino, M, Maffei, ME, Win, J, Hogenhout, SA. A functional genomics approach identifies candidate effectors from the aphid species Myzus persicae (green peach aphid). PLoS genetics. 2010; 6 (11): e1001216 [OpenAIRE] [PubMed] [DOI]

Elzinga, DA, De Vos, M, Jander, G. Suppression of plant defenses by a Myzus persicae (green peach aphid) salivary effector protein. Molecular Plant-Microbe Interactions. 2014; 27 (7): 747-756 [OpenAIRE] [PubMed] [DOI]

Pitino, M, Hogenhout, SA. Aphid protein effectors promote aphid colonization in a plant species-specific manner. Molecular Plant-Microbe Interactions. 2013; 26 (1): 130-139 [OpenAIRE] [PubMed] [DOI]

14.Bos JI, Armstrong MR, Gilroy EM, Boevink PC, Hein I, Taylor RM, et al. Phytophthora infestans effector AVR3a is essential for virulence and manipulates plant immunity by stabilizing host E3 ligase CMPG1. Proceedings of the National Academy of Sciences. 2010;107(21):9909–14.

Miles, PW. Aphid saliva. Biological Reviews of the Cambridge Philosophical Society. 1999; 74 (01): 41-85 [DOI]

79 references, page 1 of 6
Abstract
Background Aphids are phloem-feeding insects that cause significant economic losses to agriculture worldwide. While feeding and probing these insects deliver molecules, called effectors, inside their host to enable infestation. The identification and characterization of these effectors from different species that vary in their host range is an important step in understanding the infestation success of aphids and aphid host range variation. This study employs a multi-disciplinary approach based on transcriptome sequencing and proteomics to identify and compare effector candidates from the broad host range aphid Myzus persicae (green peach aphid) (genotypes O, J a...
Subjects
Medical Subject Headings: food and beveragesbiochemical phenomena, metabolism, and nutrition
free text keywords: QH301 Biology, DAS, QH301, Host (biology), RNA-Seq, Rhopalosiphum padi, Genetics, Myzus cerasi, Aphid, biology.organism_classification, biology, Infestation, medicine.disease_cause, medicine, Myzus persicae, Effector, Research Article, Host-range, Proteomics, Biotechnology
Related Organizations
Funded by
EC| APHIDHOST
Project
APHIDHOST
Molecular determinants of aphid host range
  • Funder: European Commission (EC)
  • Project Code: 310190
  • Funding stream: FP7 | SP2 | ERC
79 references, page 1 of 6

1.Blackman R, Eastop V. Aphids on the World’s crops: An identification guide. Chichester. UK: Wiley; 2000. p. 466.

2.Bass C, Puinean AM, Andrews M, Cutler P, Daniels M, Elias J, et al. Mutation of a nicotinic acetylcholine receptor β subunit is associated with resistance to neonicotinoi d insecticides in the aphid Myzus persicae. Bmc Neuroscience. 2011;12(1):51.

3.Edwards OR, Franzmann B, Thackray D, Micic S. Insecticide resistance and implications for future aphid management in Australian grains and pastures: a review. Animal Production Science. 2008;48(12):1523–30.

4.Puinean AM, Foster SP, Oliphant L, Denholm I, Field LM, Millar NS, et al. Amplification of a cytochrome P450 gene is associated with resistance to neonicotinoid insecticides in the aphid Myzus persicae. PLoS Genet. 2010;6(6):e1000999.

Hillocks, R. Farming with fewer pesticides: EU pesticide review and resulting challenges for UK agriculture. Crop Protection. 2012; 31 (1): 85-93 [OpenAIRE] [DOI]

Blackman, RL, Eastop, VF. Aphids on the world’s herbaceous plants and shrubs. 2008

Jaouannet, M, Morris, JA, Hedley, PE, Bos, JIB. Characterization of Arabidopsis Transcriptional Responses to Different Aphid Species Reveals Genes that Contribute to Host Susceptibility and Non-host Resistance. Plos Pathogens. 2015; 11 (5): e1004918 [OpenAIRE] [PubMed] [DOI]

Powell, G, Tosh, CR, Hardie, J. Host plant selection by aphids: behavioral, evolutionary, and applied perspectives. Annu Rev Entomol. 2006; 51: 309-330 [OpenAIRE] [PubMed] [DOI]

Sharma, A, Khan, AN, Subrahmanyam, S, Raman, A, Taylor, GS, Fletcher, MJ. Salivary proteins of plant-feeding hemipteroids – implication in phytophagy. Bulletin of Entomological Research. 2014; 104 (02): 117-136 [PubMed] [DOI]

Atamian, HS, Chaudhary, R, Cin, VD, Bao, E, Girke, T, Kaloshian, I. In planta expression or delivery of potato aphid Macrosiphum euphorbiae effectors Me10 and Me23 enhances aphid fecundity. Molecular Plant-Microbe Interactions. 2013; 26 (1): 67-74 [PubMed] [DOI]

Bos, JI, Prince, D, Pitino, M, Maffei, ME, Win, J, Hogenhout, SA. A functional genomics approach identifies candidate effectors from the aphid species Myzus persicae (green peach aphid). PLoS genetics. 2010; 6 (11): e1001216 [OpenAIRE] [PubMed] [DOI]

Elzinga, DA, De Vos, M, Jander, G. Suppression of plant defenses by a Myzus persicae (green peach aphid) salivary effector protein. Molecular Plant-Microbe Interactions. 2014; 27 (7): 747-756 [OpenAIRE] [PubMed] [DOI]

Pitino, M, Hogenhout, SA. Aphid protein effectors promote aphid colonization in a plant species-specific manner. Molecular Plant-Microbe Interactions. 2013; 26 (1): 130-139 [OpenAIRE] [PubMed] [DOI]

14.Bos JI, Armstrong MR, Gilroy EM, Boevink PC, Hein I, Taylor RM, et al. Phytophthora infestans effector AVR3a is essential for virulence and manipulates plant immunity by stabilizing host E3 ligase CMPG1. Proceedings of the National Academy of Sciences. 2010;107(21):9909–14.

Miles, PW. Aphid saliva. Biological Reviews of the Cambridge Philosophical Society. 1999; 74 (01): 41-85 [DOI]

79 references, page 1 of 6
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