publication . Article . 2012

Spoligotyping of Mycobacterium africanum, Burkina Faso.

Guislaine Refrégier; Adama Ouiminga; Sanou Adama; Christophe Sola; Serge Diagbouga; Antoinette Kaboré; Michel K. Gomgnimbou;
Open Access English
  • Published: 01 Jan 2012
  • Publisher: HAL CCSD
  • Country: France
Abstract
International audience; Using Ziehl-Neelsen-positive slides collected from tuberculosis diagnostic centers in Burkina Faso, we showed that 20% of 80 spoligotyping-positive DNA samples had a characteristic Mycobacterium africanum-specific genomic signature. This result suggests that M. africanum is still present in Burkina Faso at almost the same prevalence as 15-20 years ago.
Subjects
Medical Subject Headings: parasitic diseaseshealth care economics and organizationsgeographic locationspopulation characteristics
free text keywords: MESH: Bacterial Typing Techniques, MESH: Burkina Faso, MESH: DNA, Bacterial, MESH: Genotype, MESH: Humans, MESH: Mycobacterium, MESH: Mycobacterium Infections, [SDV.BBM]Life Sciences [q-bio]/Biochemistry, Molecular Biology, [SDV.MP]Life Sciences [q-bio]/Microbiology and Parasitology, Microbiology (medical), Epidemiology, Infectious Diseases, Dispatch, Burkina Faso, spoligotyping, bacteria, tuberculosis and other mycobacteria, R, Infectious and parasitic diseases, RC109-216, Mycobacterium africanum, biology.organism_classification, biology, Tuberculosis, medicine.disease, medicine, Virology, Genotype, Mycobacterium, Genomic signature, Microbiology, Mycobacterium Infections

1. de Jong BC, An tonio M, Gagneux S Mycobacterium africanum–review of an important cause of human tuberculosis in west Africa.PLoS Negl Trop Dis. 2010;4:e744 10.1371/journal.pntd.0000744 20927191 [OpenAIRE] [PubMed] [DOI]

2. Godreuil S, Torrea G, Terru D, Chevenet F, Diagbouga S, Supply P, First molecular epidemiology study of Mycobacterium tuberculosis in Burkina Faso.J Clin Microbiol. 2007;45:921–7 10.1128/JCM.01918-06 17251410 [OpenAIRE] [PubMed] [DOI]

3. Viana-Niero C, Gutierrez C, Sola C, Filliol I, Boulahbal F, Vincent V, Genetic diversity of Mycobacterium africanum clinical isolates based on IS 6110-restriction fragment length polymorphism analysis, spoligotyping, and variable number of tandem DNA repeats.J Clin Microbiol. 2001;39:57–65 10.1128/JCM.39.1.57-65.2001 11136749 [OpenAIRE] [PubMed] [DOI]

4. Intemann CD, Thye T, Niemann S, Browne EN, Amanua Chinbuah M, Enimil A, Autophagy gene variant IRGM −261T contributes to protection from tuberculosis caused by Mycobacterium tuberculosis but not by M. africanum strains.PLoS Pathog. 2009;5:e1000577 Epub 2009 Sep 11 10.1371/journal.ppat.1000577 19750224 [OpenAIRE] [PubMed] [DOI]

5. Ledru S, Cauchoix B, Yameogo M, Zoubga A, Lamande-Chiron J, Portaels F, Impact of short-course therapy on tuberculosis drug resistance in south-west Burkina Faso.Tuber Lung Dis. 1996;77:429–36 10.1016/S0962-8479(96)90116-1 8959147 [PubMed] [DOI]

6. Zhang J, Abadia E, Refregier G, Tafaj S, Boschiroli ML, Guillard B, Mycobacterium tuberculosis complex CRISPR genotyping: improving efficiency, throughput and discriminative power of “spoligotyping” with new spacers and a microbead-based hybridization assay.J Med Microbiol. 2010;59:285–94 10.1099/jmm.0.016949-0 19959631 [OpenAIRE] [PubMed] [DOI]

7. Kamble RR, Shinde VS, Madhale SP, Kamble AA, Ravikumar BP, Jadhav RS Extraction and detection of Mycobacterium leprae DNA from ZNCF-stained skin smear slides for better identification of negative skin smears.Indian J Med Microbiol. 2010;28:57–9 10.4103/0255-0857.58732 20061767 [OpenAIRE] [PubMed] [DOI]

8. van der Zanden AG, Hoentjen AH, Heilmann FG, Weltevreden EF, Schouls LM, van Embden JD Simultaneous detection and strain differentiation of Mycobacterium tuberculosis complex in paraffin wax embedded tissues and in stained microscopic preparations.Mol Pathol. 1998;51:209–14 10.1136/mp.51.4.209 9893747 [OpenAIRE] [PubMed] [DOI]

9. Brudey K, Driscoll J, Rigouts L, Prodinger WM, Gori A, Al-Hajoj SAM, Mycobacterium tuberculosis complex genetic diversity: mining the fourth international spoligotyping database (SpolDB4) for classification, Population Genetics, and Epidemiology.BMC Microbiol. 2006;6:23 10.1186/1471-2180-6-23 16519816 [OpenAIRE] [PubMed] [DOI]

10. Frothingham R, Strickland PL, Bretzel G, Ramaswamy S, Musser JM, Williams DL Phenotypic and genotypic characterization of Mycobacterium africanum isolates from west Africa.J Clin Microbiol. 1999;37:1921–6 10325347 [OpenAIRE] [PubMed]

11. Vasconcellos SE, Huard RC, Niemann S, Kremer K, Santos AR, Suffys PN, Distinct genotypic profiles of the two major clades of Mycobacterium africanum.BMC Infect Dis. 2010;10:80 10.1186/1471-2334-10-80 20350321 [OpenAIRE] [PubMed] [DOI]

12. Huet M, Rist N, Boube G, Potier D Etude bactériologique de la tuberculose au Cameroon.Rev Tuberc Pneumol (Paris). 1971;35:413–26 5002285 [PubMed]

13. Niobe-Eyangoh SN, Kuaban C, Sorlin P, Cunin P, Thonnon J, Sola C, Genetic biodiversity of Mycobacterium tuberculosis complex strains from patients with pulmonary tuberculosis in Cameroon.J Clin Microbiol. 2003;41:2547–53 10.1128/JCM.41.6.2547-2553.2003 12791879 [OpenAIRE] [PubMed] [DOI]

14. Keating LA, Wheeler PR, Mansoor H, Inwald JK, Dale J, Hewinson RG, The pyruvate requirement of some members of the Mycobacterium tuberculosis complex is due to an inactive pyruvate kinase: implications for in vivo growth.Mol Microbiol. 2005;56:163–74 10.1111/j.1365-2958.2005.04524.x 15773987 [OpenAIRE] [PubMed] [DOI]

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