publication . Preprint . Conference object . 2013

Relaying in Diffusion-Based Molecular Communication

Arash Einolghozati; Mohsen Sardari; Faramarz Fekri;
Open Access English
  • Published: 12 Oct 2013
Abstract
This paper is eligible for the student paper award. Molecular communication between biological entities is a new paradigm in communications. Recently, we studied molecular communication between two nodes formed from synthetic bacteria. Due to high randomness in behavior of bacteria, we used a population of them in each node. The reliability of such communication systems depends on both the maximum concentration of molecules that a transmitter node is able to produce at the receiver node as well as the number of bacteria in each nodes. This maximum concentration of molecules falls with distance which makes the communication to the far nodes nearly impossible. In ...
Persistent Identifiers
Subjects
arXiv: Computer Science::Information Theory
ACM Computing Classification System: Data_CODINGANDINFORMATIONTHEORY
free text keywords: Computer Science - Emerging Technologies, Computer Science - Information Theory, Quantitative Biology - Molecular Networks, Transmitter, Randomness, Computer network, business.industry, business, Molecular communication, Communications system, Computer science, Population, education.field_of_study, education, Decode and forward, Relay, law.invention, law, Channel capacity

[1] B. L. Bassler, “How bacteria talk to each other: regulation of gene expression by quorum sensing.” Curr Opin Microbiol, vol. 2, no. 6, pp. 582-587, Dec 1999.

[2] I. Mian and C. Rose, “Communication theory and multicellular biology,” Integrative Biology, vol. 3, no. 4, pp. 350-367, April 2011.

[3] I. Akyildiz, F. Fekri, R. Sivakumar, C. Forest, and B. Hammer, “Monaco: fundamentals of molecular nano-communication networks,” Wireless Communications, IEEE, vol. 19, no. 5, pp. 12 -18, oct. 2012.

[4] P.-C. Yeh, K.-C. Chen, Y.-C. Lee, L.-S. Meng, P.-J. Shih, P.-Y. Ko, W.-A. Lin, and C.-H. Lee, “A new frontier of wireless communication theory: diffusion-based molecular communications,” Wireless Communications, IEEE, vol. 19, no. 5, pp. 28 -35, oct. 2012.

[5] A. Einolghozati, M. Sardari, A. Beirami, and F. Fekri, “Capacity of discrete molecular diffusion channels,” in 2011 IEEE International Symposium on Information Theory (ISIT 2011).

[6] A. Einolghozati, M. Sardari, , and F. Fekri, “Capacity of diffusionbased molecular communication with ligand receptors,” in 2011 IEEE Information Theory Workshop.

[7] R. Song, C. Rose, Y.-L. Tsai, and I. Mian, “Wireless signaling with identical quanta,” in IEEE Wireless Communications and Networking Conference (WCNC), 2012.

[8] K. Srinivas, A. Eckford, and R. Adve, “Molecular communication in fluid media: The additive inverse gaussian noise channel,” Information Theory, IEEE Transactions on, vol. 58, no. 7, pp. 4678 -4692, july 2012.

[9] A. Einolghozati, M. Sardari, A. Beirami, and F. Fekri, “Data gathering in networks of bacteria colonies: Collective sensing and relaying using molecular communication,” in NetSci Com workshop at 31th Annual IEEE Conference on Computer Communications (INFOCOM 2012).

[10] A. Einolghozati, M. Sardari, and F. Fekri, “Collective sensing-capacity of bacteria populations,” in 2012 IEEE International Symposium on Information Theory (ISIT 2012).

[11] --, “Molecular communication between two populations of bacteria,” in 2012 IEEE Information Theory Workshop.

[12] T. Nakano and J. Shuai, “Repeater design and modeling for molecular communication networks,” in Computer Communications Workshops (INFOCOM WKSHPS), 2011 IEEE Conference on, april 2011, pp. 501 -506.

[13] B. Atakan and O. B. Akan, “On molecular multiple-access, broadcast, and relay channels in nanonetworks,” in Proceedings of the 3rd International Conference on Bio-Inspired Models of Network, Information and Computing Sytems, ser. BIONETICS '08, 2008, pp. 16:1-16:8.

[14] J. Muller, C. Kuttler, and B. A. Hense, “Sensitivity of the quorum sensing system is achieved by low pass filtering.” Bio Systems, vol. 92, no. 1, pp. 76-81, 2008.

[15] H. Berg, Random Walks in Biology. Princeton, 1977.

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