publication . Article . Other literature type . 2011

A remarkably stable TipE gene cluster: evolution of insect Para sodium channel auxiliary subunits.

Li, Jia; Waterhouse, Robert M; Zdobnov, Evgeny M;
  • Published: 01 Nov 2011
  • Publisher: Springer Nature
  • Country: Switzerland
Abstract
<p>Abstract</p> <p>Background</p> <p>First identified in fruit flies with temperature-sensitive paralysis phenotypes, the <it>Drosophila melanogaster TipE </it>locus encodes four voltage-gated sodium (Na<sub>V</sub>) channel auxiliary subunits. This cluster of <it>TipE</it>-like genes on chromosome 3L, and a fifth family member on chromosome 3R, are important for the optional expression and functionality of the Para Na<sub>V </sub>channel but appear quite distinct from auxiliary subunits in vertebrates. Here, we exploited available arthropod genomic resources to trace the origin of <it>TipE</it>-like genes by mapping their evolutionary histories and examining th...
Subjects
free text keywords: Animals, Drosophila Proteins/genetics, Drosophila melanogaster/genetics, Evolution, Molecular, Genes, Insect, Genome, Insect, Insect Proteins/genetics, Insects/genetics, Membrane Proteins/genetics, Multigene Family, Phylogeny, Protein Subunits/genetics, Sodium Channels/genetics, Ecology, Evolution, Behavior and Systematics, Locus (genetics), Drosophila melanogaster, biology.organism_classification, biology, Evolutionary biology, Gene, Genetics, Protein subunit, Phylogenetics, Drosophila Protein, Gene cluster, Chromosome, ddc:576.5, Research Article, Evolution, QH359-425
Funded by
SNSF| Swiss PhD Training Network in Bioinformatics
Project
  • Funder: Swiss National Science Foundation (SNSF)
  • Project Code: PDAMP3_127218
  • Funding stream: Programmes | ProDoc
,
SNSF| Computational comparative analysis of insect genomes
Project
  • Funder: Swiss National Science Foundation (SNSF)
  • Project Code: 31003A-112588
  • Funding stream: Project funding | Project funding (Div. I-III)
,
SNSF| Computational insect genomics
Project
  • Funder: Swiss National Science Foundation (SNSF)
  • Project Code: 31003A-125350
  • Funding stream: Project funding | Project funding (Div. I-III)
62 references, page 1 of 5

Widmark, J, Sundström, G, Ocampo Daza, D, Larhammar, D. Differential Evolution of Voltage-Gated Sodium Channels in Tetrapods and Teleost Fishes. Molecular Biology and Evolution. 2011; 28: 859-871 [OpenAIRE] [PubMed] [DOI]

Tseng, TT, McMahon, AM, Johnson, VT, Mangubat, EZ, Zahm, RJ, Pacold, ME, Jakobsson, E. Sodium channel auxiliary subunits. J Mol Microbiol Biotechnol. 2007; 12: 249-262 [OpenAIRE] [PubMed] [DOI]

Kulkarni, NH, Yamamoto, AH, Robinson, KO, Mackay, TFC, Anholt, RRH. The DSC1 channel, encoded by the smi60E locus, contributes to odor-guided behavior in Drosophila melanogaster. Genetics. 2002; 161: 1507-1516 [OpenAIRE] [PubMed]

Zhou, W, Chung, I, Liu, Z, Goldin, AL, Dong, K. A voltage-gated calcium-selective channel encoded by a sodium channel-like gene. Neuron. 2004; 42: 101-112 [OpenAIRE] [PubMed] [DOI]

Suzuki, DT, Grigliatti, T, Williamson, R. Temperature-sensitive mutations in Drosophila melanogaster. VII. A mutation (para-ts) causing reversible adult paralysis. Proc Natl Acad Sci USA. 1971; 68: 890-893 [OpenAIRE] [PubMed] [DOI]

Siddiqi, O, Benzer, S. Neurophysiological defects in temperature-sensitive paralytic mutants of Drosophila melanogaster. Proc Natl Acad Sci USA. 1976; 73: 3253-3257 [OpenAIRE] [PubMed] [DOI]

Wu, CF, Ganetzky, B. Genetic alteration of nerve membrane excitability in temperature-sensitive paralytic mutants of Drosophila melanogaster. Nature. 1980; 286: 814-816 [OpenAIRE] [PubMed] [DOI]

Loughney, K, Kreber, R, Ganetzky, B. Molecular analysis of the para locus, a sodium channel gene in Drosophila. Cell. 1989; 58: 1143-1154 [OpenAIRE] [PubMed] [DOI]

Jackson, FR, Wilson, SD, Hall, LM. The tip-E mutation of Drosophila decreases saxitoxin binding and interacts with other mutations affecting nerve membrane excitability. J Neurogenet. 1986; 3: 1-17 [OpenAIRE] [PubMed] [DOI]

Ganetzky, B. Neurogenetic analysis of Drosophila mutations affecting sodium channels: synergistic effects on viability and nerve conduction in double mutants involving tip-E. J Neurogenet. 1986; 3: 19-31 [OpenAIRE] [PubMed] [DOI]

Feng, G, Deák, P, Chopra, M, Hall, LM. Cloning and functional analysis of TipE, a novel membrane protein that enhances Drosophila para sodium channel function. Cell. 1995; 82: 1001-1011 [OpenAIRE] [PubMed] [DOI]

Hodges, DD, Lee, D, Preston, CF, Boswell, K, Hall, LM, O'Dowd, DK. tipE Regulates Na+-dependent Repetitive Firing in Drosophila Neurons. Molecular and Cellular Neuroscience. 2002; 19: 402-416 [OpenAIRE] [PubMed] [DOI]

Warmke, JW, Reenan, RAG, Wang, P, Qian, S, Arena, JP, Wang, J, Wunderler, D, Liu, K, Kaczorowski, GJ, der Ploeg, LHTV, Ganetzky, B, Cohen, CJ. Functional Expression of Drosophila para Sodium Channels. The Journal of General Physiology. 1997; 110: 119-133 [OpenAIRE] [PubMed] [DOI]

Derst, C, Walther, C, Veh, RW, Wicher, D, Heinemann, SH. Four novel sequences in Drosophila melanogaster homologous to the auxiliary Para sodium channel subunit TipE. Biochem Biophys Res Commun. 2006; 339: 939-948 [OpenAIRE] [PubMed] [DOI]

Dong, K. Insect sodium channels and insecticide resistance. Invert Neurosci. 2007; 7: 17-30 [OpenAIRE] [PubMed] [DOI]

62 references, page 1 of 5
Abstract
<p>Abstract</p> <p>Background</p> <p>First identified in fruit flies with temperature-sensitive paralysis phenotypes, the <it>Drosophila melanogaster TipE </it>locus encodes four voltage-gated sodium (Na<sub>V</sub>) channel auxiliary subunits. This cluster of <it>TipE</it>-like genes on chromosome 3L, and a fifth family member on chromosome 3R, are important for the optional expression and functionality of the Para Na<sub>V </sub>channel but appear quite distinct from auxiliary subunits in vertebrates. Here, we exploited available arthropod genomic resources to trace the origin of <it>TipE</it>-like genes by mapping their evolutionary histories and examining th...
Subjects
free text keywords: Animals, Drosophila Proteins/genetics, Drosophila melanogaster/genetics, Evolution, Molecular, Genes, Insect, Genome, Insect, Insect Proteins/genetics, Insects/genetics, Membrane Proteins/genetics, Multigene Family, Phylogeny, Protein Subunits/genetics, Sodium Channels/genetics, Ecology, Evolution, Behavior and Systematics, Locus (genetics), Drosophila melanogaster, biology.organism_classification, biology, Evolutionary biology, Gene, Genetics, Protein subunit, Phylogenetics, Drosophila Protein, Gene cluster, Chromosome, ddc:576.5, Research Article, Evolution, QH359-425
Funded by
SNSF| Swiss PhD Training Network in Bioinformatics
Project
  • Funder: Swiss National Science Foundation (SNSF)
  • Project Code: PDAMP3_127218
  • Funding stream: Programmes | ProDoc
,
SNSF| Computational comparative analysis of insect genomes
Project
  • Funder: Swiss National Science Foundation (SNSF)
  • Project Code: 31003A-112588
  • Funding stream: Project funding | Project funding (Div. I-III)
,
SNSF| Computational insect genomics
Project
  • Funder: Swiss National Science Foundation (SNSF)
  • Project Code: 31003A-125350
  • Funding stream: Project funding | Project funding (Div. I-III)
62 references, page 1 of 5

Widmark, J, Sundström, G, Ocampo Daza, D, Larhammar, D. Differential Evolution of Voltage-Gated Sodium Channels in Tetrapods and Teleost Fishes. Molecular Biology and Evolution. 2011; 28: 859-871 [OpenAIRE] [PubMed] [DOI]

Tseng, TT, McMahon, AM, Johnson, VT, Mangubat, EZ, Zahm, RJ, Pacold, ME, Jakobsson, E. Sodium channel auxiliary subunits. J Mol Microbiol Biotechnol. 2007; 12: 249-262 [OpenAIRE] [PubMed] [DOI]

Kulkarni, NH, Yamamoto, AH, Robinson, KO, Mackay, TFC, Anholt, RRH. The DSC1 channel, encoded by the smi60E locus, contributes to odor-guided behavior in Drosophila melanogaster. Genetics. 2002; 161: 1507-1516 [OpenAIRE] [PubMed]

Zhou, W, Chung, I, Liu, Z, Goldin, AL, Dong, K. A voltage-gated calcium-selective channel encoded by a sodium channel-like gene. Neuron. 2004; 42: 101-112 [OpenAIRE] [PubMed] [DOI]

Suzuki, DT, Grigliatti, T, Williamson, R. Temperature-sensitive mutations in Drosophila melanogaster. VII. A mutation (para-ts) causing reversible adult paralysis. Proc Natl Acad Sci USA. 1971; 68: 890-893 [OpenAIRE] [PubMed] [DOI]

Siddiqi, O, Benzer, S. Neurophysiological defects in temperature-sensitive paralytic mutants of Drosophila melanogaster. Proc Natl Acad Sci USA. 1976; 73: 3253-3257 [OpenAIRE] [PubMed] [DOI]

Wu, CF, Ganetzky, B. Genetic alteration of nerve membrane excitability in temperature-sensitive paralytic mutants of Drosophila melanogaster. Nature. 1980; 286: 814-816 [OpenAIRE] [PubMed] [DOI]

Loughney, K, Kreber, R, Ganetzky, B. Molecular analysis of the para locus, a sodium channel gene in Drosophila. Cell. 1989; 58: 1143-1154 [OpenAIRE] [PubMed] [DOI]

Jackson, FR, Wilson, SD, Hall, LM. The tip-E mutation of Drosophila decreases saxitoxin binding and interacts with other mutations affecting nerve membrane excitability. J Neurogenet. 1986; 3: 1-17 [OpenAIRE] [PubMed] [DOI]

Ganetzky, B. Neurogenetic analysis of Drosophila mutations affecting sodium channels: synergistic effects on viability and nerve conduction in double mutants involving tip-E. J Neurogenet. 1986; 3: 19-31 [OpenAIRE] [PubMed] [DOI]

Feng, G, Deák, P, Chopra, M, Hall, LM. Cloning and functional analysis of TipE, a novel membrane protein that enhances Drosophila para sodium channel function. Cell. 1995; 82: 1001-1011 [OpenAIRE] [PubMed] [DOI]

Hodges, DD, Lee, D, Preston, CF, Boswell, K, Hall, LM, O'Dowd, DK. tipE Regulates Na+-dependent Repetitive Firing in Drosophila Neurons. Molecular and Cellular Neuroscience. 2002; 19: 402-416 [OpenAIRE] [PubMed] [DOI]

Warmke, JW, Reenan, RAG, Wang, P, Qian, S, Arena, JP, Wang, J, Wunderler, D, Liu, K, Kaczorowski, GJ, der Ploeg, LHTV, Ganetzky, B, Cohen, CJ. Functional Expression of Drosophila para Sodium Channels. The Journal of General Physiology. 1997; 110: 119-133 [OpenAIRE] [PubMed] [DOI]

Derst, C, Walther, C, Veh, RW, Wicher, D, Heinemann, SH. Four novel sequences in Drosophila melanogaster homologous to the auxiliary Para sodium channel subunit TipE. Biochem Biophys Res Commun. 2006; 339: 939-948 [OpenAIRE] [PubMed] [DOI]

Dong, K. Insect sodium channels and insecticide resistance. Invert Neurosci. 2007; 7: 17-30 [OpenAIRE] [PubMed] [DOI]

62 references, page 1 of 5
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