publication . Article . 2008

Causal Measures of Structure and Plasticity in Simulated and Living Neural Networks

Alex J, Cadotte; Thomas B, DeMarse; Ping, He; Mingzhou, Ding;
Open Access
  • Published: 07 Oct 2008 Journal: PLoS ONE, volume 3, page e3355 (eissn: 1932-6203, Copyright policy)
  • Publisher: Public Library of Science (PLoS)
A major goal of neuroscience is to understand the relationship between neural structures and their function. Recording of neural activity with arrays of electrodes is a primary tool employed toward this goal. However, the relationships among the neural activity recorded by these arrays are often highly complex making it problematic to accurately quantify a network's structural information and then relate that structure to its function. Current statistical methods including cross correlation and coherence have achieved only modest success in characterizing the structural connectivity. Over the last decade an alternative technique known as Granger causality is eme...
free text keywords: General Biochemistry, Genetics and Molecular Biology, General Agricultural and Biological Sciences, General Medicine, Medicine, R, Science, Q, Research Article, Neuroscience, Computational Biology/Computational Neuroscience, Computational Biology/Signaling Networks, Neuroscience/Neuronal Signaling Mechanisms, Neuroscience/Theoretical Neuroscience
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Article . 2008
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Article . 2008
58 references, page 1 of 4

Gerstein, GL, Nicolelis, MAL. Correlation-Based Analysis Methods for Neural Ensemble Data.. Methods for neural ensemble recording. 1999: 157-177

Chatfield, C. The analysis of time series: an introduction. 1996

Eichler, M. On the evaluation of information flow in multivariate systems by the directed transfer function.. Biological Cybernetics. 2006; 94: 469-482 [PubMed]

Granger, CWJ. Investigating causal relations by econometric models and cross-spectral methods.. Econometrics. 1969; 37: 424-438

Hesse, W, Möller, E, Arnold, M, Schack, B. The use of time-variant EEG Granger causality for inspecting directed interdependencies of neural assemblies.. J Neurosci Methods. 2003; 124: 27-44 [PubMed]

Fanselow, EE, Sameshima, K, Baccala, LA, Nicolelis, MA. Thalamic bursting in rats during different awake behavioral states.. Proc Natl Acad Sci USA. 2001; 98: 15330-15335 [OpenAIRE] [PubMed]

Carney, P, Cadotte, A, Vemuri, B, Mareci, T, Ditto, W. Functional and Anatomical Connectivity in the Rat Model of Spontaneous Limbic Seizures.. Seizure Prediction in Epilepsy: From Basic Mechanisms To Clinical Applications.

Bernasconi, C, König, P. On the directionality of cortical interactions studied by structural analysis of electrophysiological recordings.. Biol Cybern. 1999; 81: 199-210 [OpenAIRE] [PubMed]

Freiwald, WA, Valdes, P, Bosch, J, Biscay, R, Jimenez, JC. Testing non-linearity and directedness of interactions between neural groups in the macaque inferotemporal cortex.. J Neurosci Methods. 1999; 94: 105-119 [PubMed]

Liang, H, Ding, M, Nakamura, R, Bressler, SL. Causal influences in primate cerebral cortex during visual pattern discrimination.. Neuroreport. 2000; 11: 2875-2880 [PubMed]

Baccala, LA, Sameshima, K. Partial directed coherence: a new concept in neural structure determination.. Biol Cybern. 2001; 84: 463-474 [OpenAIRE] [PubMed]

Kaminski, M, Ding, MZ, Truccolo, WA, Bressler, SL. Evaluating causal relations in neural systems: Granger causality, directed transfer function and statistical assessment of significance.. Biological Cybernetics. 2001; 85: 145-157 [OpenAIRE] [PubMed]

Liang, H, Bressler, SL, Ding, M, Truccolo, WA, Nakamura, R. Synchronized activity in prefrontal cortex during anticipation of visuomotor processing.. Neuroreport. 2002; 13: 2011-2015 [PubMed]

Formisano, E, Kim, DS, Di Salle, F, van de Moortele, PF, Ugurbil, K. Mirror-symmetric tonotopic maps in human primary auditory cortex.. Neuron. 2003; 40: 859-869 [PubMed]

Brovelli, A, Ding, MZ, Ledberg, A, Chen, YH, Nakamura, R, Bressler, SL. Beta oscillations in a large-scale sensorimotor cortical network: Directional influences revealed by Granger causality.. Proc Natl Acad Sci U S A. 2004; 101: 9849-9854 [OpenAIRE] [PubMed]

58 references, page 1 of 4
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