publication . Conference object . 2016

TBro - a transcriptome browser for de novo RNA-sequencing experiments

Ankenbrand, Markus J.; Weber, Lorenz; Becker, Dirk; Förster, Frank; Bemm, Felix;
Open Access
  • Published: 13 Sep 2016
Abstract
Nowadays, information about the identity and expression levels of genes are often retrieved by RNA-sequencing (RNA-seq). One of its major challenges is gaining biologically meaningful information from the vast amount of short read data. Therefore, tools for assembly and quantification have been developed. Still, the problem remains, that their results are often huge text files which are difficult to handle and interpret. Here we present TBro, a flexible denovo transcriptome browser, tackling this challenge. It aggregates data from different sources and allows interactive exploration of transcriptomes. This comprises assembled sequences as well as multiple annota...
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free text keywords: Transcriptome, Browser, Expression, Visualization, Transcriptome, Browser, Expression, Visualization
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Open Access
https://dx.doi.org/10.5281/zen...
Conference object . 2016
Provider: Datacite
Open Access
ZENODO
Conference object . 2016
Provider: ZENODO
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