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Other literature type . 2024
License: CC BY
Data sources: ZENODO
ZENODO
Other literature type . 2024
License: CC BY
Data sources: Datacite
ZENODO
Other literature type . 2024
License: CC BY
Data sources: Datacite
ZENODO
Other literature type . 2024
License: CC BY
Data sources: Datacite
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Enabling data interpretability and reuse in light microscopy through consensus building, community engagement, and a next-generation metadata framework

Authors: Grunwald, David; Moore, Josh; Strambio-De-Castiliia, Caterina;

Enabling data interpretability and reuse in light microscopy through consensus building, community engagement, and a next-generation metadata framework

Abstract

Microscopy has provided extraordinary insight into the structure and function of human tissues and, with the rate of technical advancements, will undoubtedly lead to further unimaginable biomedical breakthroughs. Yet, although microscopes are a standard fixture in countless research laboratories, progress in the field is greatly hindered by a lack of interoperable hardware, software, and data formats. Images captured by one laboratory cannot be readily interpreted and utilized by others, resulting in a vast waste of time and resources. Establishing community standards that promote the interpretability and reuse of image data will boost economic development in biotechnology, make scientific knowledge and technical advancements more accessible, streamline large-scale experiments across multiple laboratories, and empower artificial intelligence and machine learning to extract crucial insights from combined biomedical imaging data. Here, we put forth a vision to expedite establishing and adopting metadata standards through community and vendor collaboration.

Keywords

Microscopy, BioImaging North America, microscope hardware, metadata, RDM, QUAREP-LiMi, data management and sharing, bioimage data reuse, quality control, bioimaging, calibration

  • BIP!
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    citations
    This is an alternative to the "Influence" indicator, which also reflects the overall/total impact of an article in the research community at large, based on the underlying citation network (diachronically).
    0
    popularity
    This indicator reflects the "current" impact/attention (the "hype") of an article in the research community at large, based on the underlying citation network.
    Average
    influence
    This indicator reflects the overall/total impact of an article in the research community at large, based on the underlying citation network (diachronically).
    Average
    impulse
    This indicator reflects the initial momentum of an article directly after its publication, based on the underlying citation network.
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citations
This is an alternative to the "Influence" indicator, which also reflects the overall/total impact of an article in the research community at large, based on the underlying citation network (diachronically).
BIP!Citations provided by BIP!
popularity
This indicator reflects the "current" impact/attention (the "hype") of an article in the research community at large, based on the underlying citation network.
BIP!Popularity provided by BIP!
influence
This indicator reflects the overall/total impact of an article in the research community at large, based on the underlying citation network (diachronically).
BIP!Influence provided by BIP!
impulse
This indicator reflects the initial momentum of an article directly after its publication, based on the underlying citation network.
BIP!Impulse provided by BIP!
0
Average
Average
Average
Green