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https://dx.doi.org/10.3389/fpl...
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On the current status of Phakopsora pachyrhizi genome sequencing

descriptionPublicationkeyboard_double_arrow_right Article , Other literature type 01 Jan 2014 France Publisher:Frontiers Media SAJournal:Frontiers in Plant Science, volume 5 (eissn: 1664-462X, Copyright policy )Funded by:ANR | ARBRE
Authors: Marco eLoehrer; Alexander eVogel; Bruno eHuettel; Richard eReinhardt; Vladimir eBenes; Sébastien eDuplessis; Bjoern eUsadel; +2 Authors

doi: 10.3389/fpls.2014.00377

pmid: 25221558

pmc: PMC4147182

handle: 11858/00-001M-0000-0024-CF0F-4 , 21.11116/0000-0005-9690-E

On the current status of Phakopsora pachyrhizi genome sequencing

Abstract

Recent advances in the field of sequencing technologies and bioinformatics allow a more rapid access to genomes of non-model organisms at sinking costs. Accordingly, draft genomes of several economically important cereal rust fungi have been released in the last 3 years. Aside from the very recent flax rust and poplar rust draft assemblies there are no genomic data available for other dicot-infecting rust fungi. In this article we outline rust fungus sequencing efforts and comment on the current status of Phakopsora pachyrhizi (Asian soybean rust) genome sequencing.

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France
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Keywords

[SDV.SA]Life Sciences [q-bio]/Agricultural sciences, 570, glycine max, champignon pathogène, Plant Science, 630, SB1-1110, fungal genomics;rust fungi;Asian soybean rust;next-generation sequencing;herterozygosity;genome size;k-mer analysis, k-mer analysis, [SDV.BV]Life Sciences [q-bio]/Vegetal Biology, [SDV.BV] Life Sciences [q-bio]/Vegetal Biology, soja, rust fungi genome sizes, bioinformatique, phakopsora pachyrhizi, [SDV.SA] Life Sciences [q-bio]/Agricultural sciences, herterozygosity, genome information, Vegetal Biology, Asian soybean rust, Plant culture, fungal genomics, Agricultural sciences, rust fungi, genome size, next-generation sequencing, taille du génome, Sciences agricoles, Biologie végétale, séquençage de gènes

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    This is an alternative to the "Influence" indicator, which also reflects the overall/total impact of an article in the research community at large, based on the underlying citation network (diachronically).
    		 21
    popularity
    This indicator reflects the "current" impact/attention (the "hype") of an article in the research community at large, based on the underlying citation network.
    		 Top 10%
    influence
    This indicator reflects the overall/total impact of an article in the research community at large, based on the underlying citation network (diachronically).
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    impulse
    This indicator reflects the initial momentum of an article directly after its publication, based on the underlying citation network.
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selected citations
These citations are derived from selected sources.
This is an alternative to the "Influence" indicator, which also reflects the overall/total impact of an article in the research community at large, based on the underlying citation network (diachronically).
BIP!Citations provided by BIP!
popularity
This indicator reflects the "current" impact/attention (the "hype") of an article in the research community at large, based on the underlying citation network.
BIP!Popularity provided by BIP!
influence
This indicator reflects the overall/total impact of an article in the research community at large, based on the underlying citation network (diachronically).
BIP!Influence provided by BIP!
impulse
This indicator reflects the initial momentum of an article directly after its publication, based on the underlying citation network.
BIP!Impulse provided by BIP!
21
Top 10%
Average
Top 10%
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gold
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