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Cross-product extensions of the Gene Ontology

Authors: Mungall, C J; Bada, M; Berardini, T Z; Deegan, J; Ireland, A; Harris, M A; Hill, D P; +1 Authors

Cross-product extensions of the Gene Ontology

Abstract

AbstractThe Gene Ontology is being normalized and extended to include computable logical definitions. These definitions are partitioned into mutually exclusive cross-product sets, many of which reference other OBO Foundry ontologies. The results can be used to reason over the ontology, and to make cross-ontology queries.

Country
United States
Keywords

Databases-Genetic, Bioinformatics, Logic, Cells, Health Informatics, Cell-Biology, Genetics & Genomics, Gene, Cross-products, Vocabulary-Controlled, Databases, Genetic, Genetics, Animals, Humans, Pathways, Molecular Biology, CHEBI, Molecular-Biology, OWL, Ontology, Reasoning, Cell Biology, 004, Computer Science Applications, Database-Management-Systems, Genes, Vocabulary, Controlled, GO, Database Management Systems, Gene expression, Term enrichment, Anatomy

  • BIP!
    Impact byBIP!
    citations
    This is an alternative to the "Influence" indicator, which also reflects the overall/total impact of an article in the research community at large, based on the underlying citation network (diachronically).
    98
    popularity
    This indicator reflects the "current" impact/attention (the "hype") of an article in the research community at large, based on the underlying citation network.
    Top 10%
    influence
    This indicator reflects the overall/total impact of an article in the research community at large, based on the underlying citation network (diachronically).
    Top 1%
    impulse
    This indicator reflects the initial momentum of an article directly after its publication, based on the underlying citation network.
    Top 1%
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citations
This is an alternative to the "Influence" indicator, which also reflects the overall/total impact of an article in the research community at large, based on the underlying citation network (diachronically).
BIP!Citations provided by BIP!
popularity
This indicator reflects the "current" impact/attention (the "hype") of an article in the research community at large, based on the underlying citation network.
BIP!Popularity provided by BIP!
influence
This indicator reflects the overall/total impact of an article in the research community at large, based on the underlying citation network (diachronically).
BIP!Influence provided by BIP!
impulse
This indicator reflects the initial momentum of an article directly after its publication, based on the underlying citation network.
BIP!Impulse provided by BIP!
98
Top 10%
Top 1%
Top 1%
Green
gold