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Coordination Chemistry Reviews
Article . 2025 . Peer-reviewed
License: Elsevier TDM
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Coupled binuclear copper sites in biology: An experimentally-calibrated computational perspective

Authors: Stanczak, A. (Agnieszka); Kipouros, I.; Eminger, P. (Petr); Dunietz, E. M.; Solomon, E. I.; Rulíšek, L. (Lubomír);

Coupled binuclear copper sites in biology: An experimentally-calibrated computational perspective

Abstract

The broad class of O-2-activating coupled-binuclear copper (CBC) metalloenzymes contain a unique [Cu2O2] catalytic core. This core is responsible for catalyzing challenging biochemical transformations, particularly the regioselective monooxygenations/oxidations of substituted phenols. Despite almost four decades of intense experimental and theoretical research, the factors governing the diverse reactivity of CBC enzymes had remained only partially understood. In this review, we highlight the recent synergy between spectroscopy, kinetic experiments, and state-of-the-art computations (including hybrid quantum and molecular mechanical, QM/MM, and advanced wave function theory, WFT, methods) that provided a conclusive mechanistic picture of the initial stages of the ortho-hydroxylation of phenolic substrates catalyzed by the CBC enzyme tyrosinase (Ty). We emphasize the power of calibrated theoretical calculations, supported by experimental spectroscopic and kinetic data on intermediates, in providing definitive insight into the catalytic reaction coordinate. We provide a critical review of previous efforts towards elucidating structure-function correlations over the four CBC protein classes (hemocyanins, catechol oxidases, tyrosinases, o-aminophenol oxygenases). We outline how a systematic mechanistic understanding across the different CBC enzyme classes could uncover their elusive structure-function correlations, opening new possibilities for utilizing the [Cu2O2] catalytic core outside its native biological context for applications in materials and biocatalysis.

Country
Czech Republic
Related Organizations
Keywords

QM/MM modeling, spectroscopy, structure/function correlations, kinetics, WFT& DFT, [Cu2O2] active sites, coupled binuclear copper (CBC)

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citations
This is an alternative to the "Influence" indicator, which also reflects the overall/total impact of an article in the research community at large, based on the underlying citation network (diachronically).
BIP!Citations provided by BIP!
popularity
This indicator reflects the "current" impact/attention (the "hype") of an article in the research community at large, based on the underlying citation network.
BIP!Popularity provided by BIP!
influence
This indicator reflects the overall/total impact of an article in the research community at large, based on the underlying citation network (diachronically).
BIP!Influence provided by BIP!
impulse
This indicator reflects the initial momentum of an article directly after its publication, based on the underlying citation network.
BIP!Impulse provided by BIP!
0
Average
Average
Average