TreeCluster: Massively scalable transmission clustering using phylogenetic trees

Preprint OPEN
Moshiri, Alexander;
  • Related identifiers: doi: 10.1101/261354
  • Subject:
    acm: ComputingMethodologies_PATTERNRECOGNITION

Background: The ability to infer transmission clusters from molecular data is critical to designing and evaluating viral control strategies. Viral sequencing datasets are growing rapidly, but standard methods of transmission cluster inference do not scale well beyond th... View more
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