Simultaneous estimation of transcript abundances and transcript specific fragment distributions of RNA-Seq data with the Mix2 model

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Tuerk, Andreas; Wiktorin, Gregor;
(2014)
  • Related identifiers: doi: 10.1101/005918
  • Subject: bepress|Life Sciences|Biology | bepress|Life Sciences|Bioinformatics

Quantification of RNA transcripts with RNA-Seq is inaccurate due to positional fragmentation bias, which is not represented appropriately by current statistical models of RNA-Seq data. Another, less investigated, source of error is the inaccuracy of transcript start and... View more
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