Ancestral sequence reconstruction with Maximum Parsimony
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Subject: Mathematics - Combinatorics | Quantitative Biology - Populations and Evolutionarxiv: Quantitative Biology::Genomics | Quantitative Biology::Populations and Evolution
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References
(15)
15 references, page 1 of 2
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1. M. Steel and M. Charleston, Five surprising properties of parsimoniously colored trees, Bulletin of Mathematical Biology, Volume 57, page 367-375 (1995)
2. W. M. Fitch, Toward Defining the Course of Evolution: Minimum Change for a Specific Tree Topology, Systematic Zoology, Volume 20, page 406-416 (1971)
3. L. Herbst, Ancestral state reconstruction with parsimony, Master Thesis, Greifswald (2015)
4. I. P. Goulden and D. M. Jackson, Combinatorial Enumeration, Wiley, New York (1983)
5. C. Semple and M. Steel, Phylogenetics, Oxford University Press, New York (2003)
6. J. Felsenstein, Inferring Phylogenies, Sinauer Associates, Inc (2004)
7. D. A. Liberles (ed), Ancestral Sequence Reconstruction, Oxford University Press, New York (2007)
8. L. Szekely, P. Erd¨os and M. Steel, The Combinatorics of Evolutionary Trees - a Survey, Journal of Combinatorial Mathematics and Combinatorial Computing, Volume 15, page 241-254 (1994)
9. O. Gascuel and M.Steel, Predicting the ancestral character changes in a tree is typically easier than predicting the root state, Systematic Biology, Volume 63, page 421-435 (2014)
10. O. Gascuel and M.Steel, Inferring ancestral sequences in taxon-rich phylogenies, Mathematical Biosciences, Volume 227, page 125-153 (2010)
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