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Article . 2025
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Bounded Weighted Edit Distance: Dynamic Algorithms and Matching Lower Bounds

Authors: Boneh, Itai; Gorbachev, Egor; Kociumaka, Tomasz;

Bounded Weighted Edit Distance: Dynamic Algorithms and Matching Lower Bounds

Abstract

The edit distance $ed(X,Y)$ of two strings $X,Y\in Σ^*$ is the minimum number of character edits (insertions, deletions, and substitutions) needed to transform $X$ into $Y$. Its weighted counterpart $ed^w(X,Y)$ minimizes the total cost of edits, which are specified using a function $w$, normalized so that each edit costs at least one. The textbook dynamic-programming procedure, given strings $X,Y\in Σ^{\le n}$ and oracle access to $w$, computes $ed^w(X,Y)$ in $O(n^2)$ time. Nevertheless, one can achieve better running times if the computed distance, denoted $k$, is small: $O(n+k^2)$ for unit weights [Landau and Vishkin; JCSS'88] and $\tilde{O}(n+\sqrt{nk^3})$ for arbitrary weights [Cassis, Kociumaka, Wellnitz; FOCS'23]. In this paper, we study the dynamic version of the weighted edit distance problem, where the goal is to maintain $ed^w(X,Y)$ for strings $X,Y\in Σ^{\le n}$ that change over time, with each update specified as an edit in $X$ or $Y$. Very recently, Gorbachev and Kociumaka [STOC'25] showed that the unweighted distance $ed(X,Y)$ can be maintained in $\tilde{O}(k)$ time per update after $\tilde{O}(n+k^2)$-time preprocessing; here, $k$ denotes the current value of $ed(X,Y)$. Their algorithm generalizes to small integer weights, but the underlying approach is incompatible with large weights. Our main result is a dynamic algorithm that maintains $ed^w(X,Y)$ in $\tilde{O}(k^{3-γ})$ time per update after $\tilde{O}(nk^γ)$-time preprocessing. Here, $γ\in [0,1]$ is a real trade-off parameter and $k\ge 1$ is an integer threshold fixed at preprocessing time, with $\infty$ returned whenever $ed^w(X,Y)>k$. We complement our algorithm with conditional lower bounds showing fine-grained optimality of our trade-off for $γ\in [0.5,1)$ and justifying our choice to fix $k$.

ESA 2025

Keywords

FOS: Computer and information sciences, dynamic algorithms, conditional lower bounds, Data Structures and Algorithms, Edit distance, Data Structures and Algorithms (cs.DS), ddc: ddc:004

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selected citations
These citations are derived from selected sources.
This is an alternative to the "Influence" indicator, which also reflects the overall/total impact of an article in the research community at large, based on the underlying citation network (diachronically).
BIP!Citations provided by BIP!
popularity
This indicator reflects the "current" impact/attention (the "hype") of an article in the research community at large, based on the underlying citation network.
BIP!Popularity provided by BIP!
influence
This indicator reflects the overall/total impact of an article in the research community at large, based on the underlying citation network (diachronically).
BIP!Influence provided by BIP!
impulse
This indicator reflects the initial momentum of an article directly after its publication, based on the underlying citation network.
BIP!Impulse provided by BIP!
0
Average
Average
Average
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