publication . Article . Other literature type . 2015

Pathways and Bioenergetics of Anaerobic Carbon Monoxide Fermentation.

Martijn Diender; Alfons J. M. Stams; Diana Z. Sousa;
Open Access
  • Published: 19 Nov 2015
Abstract
Carbon monoxide can act as a substrate for different modes of fermentative anaerobic metabolism. The trait of utilizing CO is spread among a diverse group of microorganisms, including members of bacteria as well as archaea. Over the last decade this metabolism has gained interest due to the potential of converting CO-rich gas, such as synthesis gas, into bio-based products. Three main types of fermentative CO metabolism can be distinguished: hydrogenogenesis, methanogenesis, and acetogenesis, generating hydrogen, methane and acetate, respectively. Here, we review the current knowledge on these three variants of microbial CO metabolism with an emphasis on the pot...
Persistent Identifiers
Subjects
Medical Subject Headings: food and beverages
free text keywords: Acetogenesis, Carboxydotrophic, Hydrogenogenesis, Methanogenesis, Syngas, Water-gas shift reaction, Microbiology, Review, water–gas shift reaction, Science & Technology, Microbiology (medical), lcsh:Microbiology, lcsh:QR1-502, Archaea, biology.organism_classification, biology, Methane, chemistry.chemical_compound, chemistry, Environmental chemistry, Fermentative hydrogen production, Bacteria, Fermentation
Funded by
EC| NOVEL ANAEROBES
Project
NOVEL ANAEROBES
Novel anaerobes for a biobased economy
  • Funder: European Commission (EC)
  • Project Code: 323009
  • Funding stream: FP7 | SP2 | ERC
,
NWO| Microbes for health and environment
Project
  • Funder: Netherlands Organisation for Scientific Research (NWO) (NWO)
  • Project Code: 2300181602
Download fromView all 9 versions
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Article . 2015
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Article . 2015
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Article . 2015
Provider: NARCIS
175 references, page 1 of 12

Abbanat, D. R., and Ferry, J. G. (1991). Resolution of component proteins in an enzyme complex from Methanosarcina thermophila catalyzing the synthesis or cleavage of acetyl-CoA. Proc. Natl. Acad. Sci. U.S.A. 88, 3272-3276. doi: 10.1073/pnas.88.8.3272 [OpenAIRE]

Abrini, J., Naveau, H., and Nyns, E.-J. (1994). Clostridium autoethanogenum, sp. nov., an anaerobic bacterium that produces ethanol from carbon monoxide. Arch. Microbiol. 161, 345-351. doi: 10.1007/BF00303591

Adams, M. W. (1990a). The metabolism of hydrogen by extremely thermophilic, sulfur-dependent bacteria. FEMS Microbiol. Rev. 75, 219-237. doi: 10.1111/j.1574-6968.1990.tb04096.x

Adams, M. W. (1990b). The structure and mechanism of iron-hydrogenases. Biochim. Biophys. Acta 1020, 115-145. doi: 10.1016/0005-2728(90)90044-5

Afting, C., Hochheimer, A., and Thauer, R. (1998). Function of H2-forming methylenetetrahydromethanopterin dehydrogenase from Methanobacterium thermoautotrophicum in coenzyme F420 reduction with H2. Arch. Microbiol. 169, 206-210. doi: 10.1007/s002030050562 [OpenAIRE]

Afting, C., Kremmer, E., Brucker, C., Hochheimer, A., and Thauer, R. K. (2000). Regulation of the synthesis of H2-forming methylenetetrahydromethanopterin dehydrogenase (Hmd) and of HmdII and HmdIII in Methanothermobacter marburgensis. Arch. Microbiol. 174, 225-232. doi: 10.1007/s002030 000197

Allen, T. D., Caldwell, M. E., Lawson, P. A., Huhnke, R. L., and Tanner, R. S. (2010). Alkalibaculum bacchi gen. nov., sp. nov., a CO-oxidizing, ethanol-producing acetogen isolated from livestock-impacted soil. Int. J. Syst. Evol. Microbiol. 60, 2483-2489. doi: 10.1099/ijs.0.018507-0

Alves, J. I., Van Gelder, A. H., Alves, M. M., Sousa, D. Z., and Plugge, C. M. (2013). Moorella stamsii sp. nov., a new anaerobic thermophilic hydrogenogenic carboxydotroph isolated from digester sludge. Int. J. Syst. Evol. Microbiol. 63, 4072-4076. doi: 10.1099/ijs.0.050369-0 [OpenAIRE]

Bae, S. S., Kim, T. W., Lee, H. S., Kwon, K. K., Kim, Y. J., Kim, M.- S., et al. (2012). H2 production from CO, formate or starch using the hyperthermophilic archaeon, Thermococcus onnurineus. Biotechnol. Lett. 34, 75-79. doi: 10.1007/s10529-011-0732-3

Bae, S. S., Kim, Y. J., Yang, S. H., Lim, J. K., Jeon, J. H., Lee, H. S., et al. (2006). Thermococcus onnurineus sp. nov., a hyperthermophilic archaeon isolated from a deep-sea hydrothermal vent area at the PACMANUS field. J. Microbiol. Biotechnol. 16, 1826-1831.

Balch, W. E., Schoberth, S., Tanner, R. S., and Wolfe, R. (1977). Acetobacterium, a new genus of hydrogen-oxidizing, carbon dioxide-reducing, anaerobic bacteria. Int. J. Syst. Bacteriol. 27, 355-361. doi: 10.1099/00207713-27-4-355 [OpenAIRE]

Balk, M., Heilig, H. G., Van Eekert, M. H., Stams, A. J., Rijpstra, I. C., SinningheDamsté, J. S., et al. (2009). Isolation and characterization of a new CO-utilizing strain, Thermoanaerobacter thermohydrosulfuricus subsp. carboxydovorans, isolated from a geothermal spring in Turkey. Extremophiles 13, 885-894. doi: 10.1007/s00792-009-0276-9 [OpenAIRE]

Bengelsdorf, F. R., Straub, M., and Durre, P. (2013). Bacterial synthesis gas (syngas) fermentation. Environ. Technol. 34, 1639-1651. doi: 10.1080/09593330.2013.827747 [OpenAIRE]

Berg, I. A., Kockelkorn, D., Ramos-Vera, W. H., Say, R. F., Zarzycki, J., Hügler, M., et al. (2010). Autotrophic carbon fixation in archaea. Nat. Rev. Microbiol. 8, 447-460. doi: 10.1038/nrmicro2365

Bertsch, J., and Müller, V. (2015). CO metabolism in the acetogen Acetobacterium woodii. Appl. Environ. Microbiol. 81, 5949-5956. doi: 10.1128/AEM.01772-15 [OpenAIRE]

175 references, page 1 of 12
Abstract
Carbon monoxide can act as a substrate for different modes of fermentative anaerobic metabolism. The trait of utilizing CO is spread among a diverse group of microorganisms, including members of bacteria as well as archaea. Over the last decade this metabolism has gained interest due to the potential of converting CO-rich gas, such as synthesis gas, into bio-based products. Three main types of fermentative CO metabolism can be distinguished: hydrogenogenesis, methanogenesis, and acetogenesis, generating hydrogen, methane and acetate, respectively. Here, we review the current knowledge on these three variants of microbial CO metabolism with an emphasis on the pot...
Persistent Identifiers
Subjects
Medical Subject Headings: food and beverages
free text keywords: Acetogenesis, Carboxydotrophic, Hydrogenogenesis, Methanogenesis, Syngas, Water-gas shift reaction, Microbiology, Review, water–gas shift reaction, Science & Technology, Microbiology (medical), lcsh:Microbiology, lcsh:QR1-502, Archaea, biology.organism_classification, biology, Methane, chemistry.chemical_compound, chemistry, Environmental chemistry, Fermentative hydrogen production, Bacteria, Fermentation
Funded by
EC| NOVEL ANAEROBES
Project
NOVEL ANAEROBES
Novel anaerobes for a biobased economy
  • Funder: European Commission (EC)
  • Project Code: 323009
  • Funding stream: FP7 | SP2 | ERC
,
NWO| Microbes for health and environment
Project
  • Funder: Netherlands Organisation for Scientific Research (NWO) (NWO)
  • Project Code: 2300181602
Download fromView all 9 versions
Wageningen Yield
Article . 2015
Provider: NARCIS
DOAJ-Articles
Article . 2015
NARCIS
Article . 2015
Provider: NARCIS
175 references, page 1 of 12

Abbanat, D. R., and Ferry, J. G. (1991). Resolution of component proteins in an enzyme complex from Methanosarcina thermophila catalyzing the synthesis or cleavage of acetyl-CoA. Proc. Natl. Acad. Sci. U.S.A. 88, 3272-3276. doi: 10.1073/pnas.88.8.3272 [OpenAIRE]

Abrini, J., Naveau, H., and Nyns, E.-J. (1994). Clostridium autoethanogenum, sp. nov., an anaerobic bacterium that produces ethanol from carbon monoxide. Arch. Microbiol. 161, 345-351. doi: 10.1007/BF00303591

Adams, M. W. (1990a). The metabolism of hydrogen by extremely thermophilic, sulfur-dependent bacteria. FEMS Microbiol. Rev. 75, 219-237. doi: 10.1111/j.1574-6968.1990.tb04096.x

Adams, M. W. (1990b). The structure and mechanism of iron-hydrogenases. Biochim. Biophys. Acta 1020, 115-145. doi: 10.1016/0005-2728(90)90044-5

Afting, C., Hochheimer, A., and Thauer, R. (1998). Function of H2-forming methylenetetrahydromethanopterin dehydrogenase from Methanobacterium thermoautotrophicum in coenzyme F420 reduction with H2. Arch. Microbiol. 169, 206-210. doi: 10.1007/s002030050562 [OpenAIRE]

Afting, C., Kremmer, E., Brucker, C., Hochheimer, A., and Thauer, R. K. (2000). Regulation of the synthesis of H2-forming methylenetetrahydromethanopterin dehydrogenase (Hmd) and of HmdII and HmdIII in Methanothermobacter marburgensis. Arch. Microbiol. 174, 225-232. doi: 10.1007/s002030 000197

Allen, T. D., Caldwell, M. E., Lawson, P. A., Huhnke, R. L., and Tanner, R. S. (2010). Alkalibaculum bacchi gen. nov., sp. nov., a CO-oxidizing, ethanol-producing acetogen isolated from livestock-impacted soil. Int. J. Syst. Evol. Microbiol. 60, 2483-2489. doi: 10.1099/ijs.0.018507-0

Alves, J. I., Van Gelder, A. H., Alves, M. M., Sousa, D. Z., and Plugge, C. M. (2013). Moorella stamsii sp. nov., a new anaerobic thermophilic hydrogenogenic carboxydotroph isolated from digester sludge. Int. J. Syst. Evol. Microbiol. 63, 4072-4076. doi: 10.1099/ijs.0.050369-0 [OpenAIRE]

Bae, S. S., Kim, T. W., Lee, H. S., Kwon, K. K., Kim, Y. J., Kim, M.- S., et al. (2012). H2 production from CO, formate or starch using the hyperthermophilic archaeon, Thermococcus onnurineus. Biotechnol. Lett. 34, 75-79. doi: 10.1007/s10529-011-0732-3

Bae, S. S., Kim, Y. J., Yang, S. H., Lim, J. K., Jeon, J. H., Lee, H. S., et al. (2006). Thermococcus onnurineus sp. nov., a hyperthermophilic archaeon isolated from a deep-sea hydrothermal vent area at the PACMANUS field. J. Microbiol. Biotechnol. 16, 1826-1831.

Balch, W. E., Schoberth, S., Tanner, R. S., and Wolfe, R. (1977). Acetobacterium, a new genus of hydrogen-oxidizing, carbon dioxide-reducing, anaerobic bacteria. Int. J. Syst. Bacteriol. 27, 355-361. doi: 10.1099/00207713-27-4-355 [OpenAIRE]

Balk, M., Heilig, H. G., Van Eekert, M. H., Stams, A. J., Rijpstra, I. C., SinningheDamsté, J. S., et al. (2009). Isolation and characterization of a new CO-utilizing strain, Thermoanaerobacter thermohydrosulfuricus subsp. carboxydovorans, isolated from a geothermal spring in Turkey. Extremophiles 13, 885-894. doi: 10.1007/s00792-009-0276-9 [OpenAIRE]

Bengelsdorf, F. R., Straub, M., and Durre, P. (2013). Bacterial synthesis gas (syngas) fermentation. Environ. Technol. 34, 1639-1651. doi: 10.1080/09593330.2013.827747 [OpenAIRE]

Berg, I. A., Kockelkorn, D., Ramos-Vera, W. H., Say, R. F., Zarzycki, J., Hügler, M., et al. (2010). Autotrophic carbon fixation in archaea. Nat. Rev. Microbiol. 8, 447-460. doi: 10.1038/nrmicro2365

Bertsch, J., and Müller, V. (2015). CO metabolism in the acetogen Acetobacterium woodii. Appl. Environ. Microbiol. 81, 5949-5956. doi: 10.1128/AEM.01772-15 [OpenAIRE]

175 references, page 1 of 12
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