publication . Article . 2017

Identification and phylogeny of the tomato receptor-like proteins family

Ermis Yanes-Paz; Gioser María Ramos-Echazábal; Glay Chinea; Yanelis Capdesuñer Ruiz; Ramón Santos Bermúdez;
Open Access English
  • Published: 01 Mar 2017 Journal: Biotecnología Vegetal (issn: 1609-1841, eissn: 2074-8647, Copyright policy)
  • Publisher: Universidad Central Marta Abreu de Las Villas
Abstract
The receptor-like proteins (RLPs) play multiple roles in development and defense. In the current work 75 RLPs were identified in tomato (Solanum lycopersicum L.) using iterative BLAST searches and domain prediction. A phylogenetic tree including all the identified RLPs from tomato and some functionally characterized RLPs from other species was built to identify their putative homologues in tomato. We first tested whether C3-F-based phylogeny was a good indicator of functional relation between related proteins of different species. Indeed, the functionally characterized CLAVATA2 (CLV2), the maize ortholog FASCIATED EAR2 (FEA2) and a putative tomato CLV2 described...
Subjects
Medical Subject Headings: food and beveragesfungi
free text keywords: Agriculture, S, Plant culture, SB1-1110
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