publication . Other literature type . Conference object . Research . Preprint . 2018

Characterization of Biologically Relevant Network Structures form Time-series Data

Tuza, Zoltan A.; Stan, Guy-Bart;
Open Access
  • Published: 19 Dec 2018
  • Publisher: Zenodo
  • Country: United Kingdom
Abstract
Abstract High-throughput data acquisition in synthetic biology leads to an abundance of data that need to be processed and aggregated into useful biological models. Building dynamical models based on this wealth of data is of paramount importance to understand and optimize designs of synthetic biology constructs. However, building models manually for each data set is inconvenient and might become infeasible for highly complex synthetic systems. In this paper, we present state-of-the-art system identification techniques and combine them with chemical reaction network theory (CRNT) to generate dynamic models automatically. On the system identification side, Sparse...
Subjects
free text keywords: cs.SY, Computer Science - Systems and Control
Related Organizations
Funded by
EC| COSY-BIO
Project
COSY-BIO
Control Engineering of Biological Systems for Reliable Synthetic Biology Applications
  • Funder: European Commission (EC)
  • Project Code: 766840
  • Funding stream: H2020 | RIA
,
RCUK| Engineering Fellowships for Growth: Systems and control engineering framework for robust and efficient synthetic biology
Project
  • Funder: Research Council UK (RCUK)
  • Project Code: EP/M002187/1
  • Funding stream: EPSRC
Communities
FET H2020FET OPEN: FET-Open research and innovation actions
FET H2020FET OPEN: Control Engineering of Biological Systems for Reliable Synthetic Biology Applications
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Zenodo
Other literature type . 2018
Provider: Datacite
ZENODO
Conference object . 2018
Provider: ZENODO
Zenodo
Other literature type . 2018
Provider: Datacite
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